Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 RNA5SP346-201ENST00000363541 121 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LMNB1P20700 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
LMNB1P20700 RNU6-1242P-201ENST00000391052 103 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 U3.43-201ENST00000410734 213 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 AC007394.1-201ENST00000421941 531 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.82□□□□□ -1.16
LMNB1P20700 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.82□□□□□ -1.16
LMNB1P20700 USP9YP11-201ENST00000427537 717 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 AC125238.2-201ENST00000430003 1440 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 AC096638.2-201ENST00000434965 711 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 GSTA7P-201ENST00000438425 448 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC7.82□□□□□ -1.16
LMNB1P20700 ATP5C1P1-201ENST00000441945 895 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 AP006222.1-205ENST00000450734 457 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.82□□□□□ -1.16
LMNB1P20700 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.82□□□□□ -1.16
LMNB1P20700 RN7SL610P-201ENST00000463845 291 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 BET1P1-201ENST00000482276 359 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LMNB1P20700 AK4P6-201ENST00000505168 528 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.82□□□□□ -1.16
LMNB1P20700 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.82□□□□□ -1.16
LMNB1P20700 Y_RNA.655-201ENST00000515919 96 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 RNA5SP362-201ENST00000516048 118 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 AC008627.1-201ENST00000517511 1704 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC7.82□□□□□ -1.16
LMNB1P20700 IGKV2-18-201ENST00000522607 343 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC7.82□□□□□ -1.16
LMNB1P20700 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC7.82□□□□□ -1.16
LMNB1P20700 AC104229.1-201ENST00000561364 255 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC7.82□□□□□ -1.16
LMNB1P20700 AC108673.3-201ENST00000609183 335 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 AL356752.1-201ENST00000615844 593 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 AC009318.3-201ENST00000616916 503 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.82□□□□□ -1.16
LMNB1P20700 CASC19-222ENST00000641321 1173 ntBASIC7.82□□□□□ -1.16
LMNB1P20700 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
LMNB1P20700 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
LMNB1P20700 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LMNB1P20700 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.82□□□□□ -1.16
LMNB1P20700 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
LMNB1P20700 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.82□□□□□ -1.16
LMNB1P20700 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
LMNB1P20700 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.81□□□□□ -1.16
LMNB1P20700 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
LMNB1P20700 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
LMNB1P20700 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.81□□□□□ -1.16
LMNB1P20700 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 AL021877.2-201ENST00000624442 10684 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
LMNB1P20700 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 MIR1302-8-201ENST00000408342 128 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 MIR1204-201ENST00000408388 67 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 USP9YP21-201ENST00000420603 432 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 AL157884.1-201ENST00000424561 454 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 BX119904.1-201ENST00000432026 348 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.81□□□□□ -1.16
LMNB1P20700 AL627308.1-201ENST00000435693 821 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.81□□□□□ -1.16
LMNB1P20700 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.81□□□□□ -1.16
LMNB1P20700 AL445665.1-202ENST00000452436 324 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 YWHAEP1-201ENST00000453697 763 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 SNX18P26-201ENST00000458433 740 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 RPSAP37-201ENST00000470913 821 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.81□□□□□ -1.16
LMNB1P20700 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 AC108043.1-201ENST00000512696 574 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC7.81□□□□□ -1.16
LMNB1P20700 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC7.81□□□□□ -1.16
LMNB1P20700 AP000916.1-201ENST00000533869 835 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.81□□□□□ -1.16
LMNB1P20700 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC7.81□□□□□ -1.16
LMNB1P20700 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.81□□□□□ -1.16
LMNB1P20700 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.81□□□□□ -1.16
LMNB1P20700 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.81□□□□□ -1.16
LMNB1P20700 AC092106.3-201ENST00000611308 722 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.81□□□□□ -1.16
LMNB1P20700 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC7.81□□□□□ -1.16
LMNB1P20700 AC104985.3-201ENST00000623479 597 ntBASIC7.81□□□□□ -1.16
LMNB1P20700 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.81□□□□□ -1.16
LMNB1P20700 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
LMNB1P20700 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.81□□□□□ -1.16
LMNB1P20700 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.81□□□□□ -1.16
LMNB1P20700 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.81□□□□□ -1.16
LMNB1P20700 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.81□□□□□ -1.16
LMNB1P20700 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LMNB1P20700 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms