Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC138393.1-206ENST00000540997 1886 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 AL359396.1-201ENST00000623151 2376 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.34□□□□□ -1.23
NFKB1P19838 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.34□□□□□ -1.23
NFKB1P19838 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.34□□□□□ -1.23
NFKB1P19838 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.34□□□□□ -1.23
NFKB1P19838 Y_RNA.18-201ENST00000362461 102 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 RNU6-707P-201ENST00000364647 95 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 RNU4-12P-201ENST00000365233 139 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 AL590002.1-201ENST00000406554 418 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 RNA5SP80-201ENST00000410475 111 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 AC002524.1-201ENST00000411687 547 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 AC066692.1-201ENST00000421721 457 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 AC093107.1-201ENST00000422772 609 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 OR5P4P-201ENST00000424698 917 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC7.34□□□□□ -1.23
NFKB1P19838 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.34□□□□□ -1.23
NFKB1P19838 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC7.34□□□□□ -1.23
NFKB1P19838 PSPC1P2-201ENST00000455130 225 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 MTND1P11-201ENST00000456661 876 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 NDUFB4P1-201ENST00000462398 381 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 KLF3P2-201ENST00000465138 268 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC7.34□□□□□ -1.23
NFKB1P19838 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.34□□□□□ -1.23
NFKB1P19838 CCDC11P1-201ENST00000503137 1162 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 MTND5P5-201ENST00000503764 376 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC7.34□□□□□ -1.23
NFKB1P19838 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.34□□□□□ -1.23
NFKB1P19838 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
NFKB1P19838 AC004825.1-201ENST00000555068 586 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 AL049869.4-201ENST00000555669 178 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.34□□□□□ -1.23
NFKB1P19838 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC7.34□□□□□ -1.23
NFKB1P19838 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.34□□□□□ -1.23
NFKB1P19838 AC006504.3-201ENST00000586818 523 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 AC044792.1-201ENST00000593294 196 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 AC004839.1-201ENST00000610269 501 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 AC015722.2-201ENST00000622210 551 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 AC004836.1-201ENST00000623032 634 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 AC112204.3-201ENST00000623822 332 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.34□□□□□ -1.23
NFKB1P19838 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NFKB1P19838 AF001550.2-201ENST00000636643 217 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 LRRC77P-213ENST00000637727 880 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.34□□□□□ -1.23
NFKB1P19838 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 AL137918.1-201ENST00000624542 1922 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NFKB1P19838 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.34□□□□□ -1.23
NFKB1P19838 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.34□□□□□ -1.23
NFKB1P19838 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC7.34□□□□□ -1.23
NFKB1P19838 CASC19-206ENST00000641028 1430 ntBASIC7.34□□□□□ -1.23
NFKB1P19838 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NFKB1P19838 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
NFKB1P19838 CDY7P-201ENST00000429883 1604 ntBASIC7.34□□□□□ -1.24
NFKB1P19838 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
NFKB1P19838 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.24
NFKB1P19838 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
NFKB1P19838 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
NFKB1P19838 MTND4P12-201ENST00000498999 1377 ntBASIC7.33□□□□□ -1.24
NFKB1P19838 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.33□□□□□ -1.24
NFKB1P19838 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NFKB1P19838 AC092326.2-201ENST00000624772 1561 ntBASIC7.33□□□□□ -1.24
NFKB1P19838 UG0898H09-202ENST00000623646 7040 ntBASIC7.33□□□□□ -1.24
NFKB1P19838 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NFKB1P19838 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NFKB1P19838 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
NFKB1P19838 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NFKB1P19838 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.33□□□□□ -1.24
NFKB1P19838 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NFKB1P19838 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.33□□□□□ -1.24
NFKB1P19838 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NFKB1P19838 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NFKB1P19838 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NFKB1P19838 SNORA30B-201ENST00000365319 129 ntBASIC7.33□□□□□ -1.24
NFKB1P19838 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
NFKB1P19838 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NFKB1P19838 AL121977.1-201ENST00000401636 979 ntBASIC7.33□□□□□ -1.24
NFKB1P19838 CIR1P3-201ENST00000405137 479 ntBASIC7.33□□□□□ -1.24
NFKB1P19838 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7.33□□□□□ -1.24
NFKB1P19838 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC7.33□□□□□ -1.24
NFKB1P19838 AC007435.1-201ENST00000421086 415 ntBASIC7.33□□□□□ -1.24
NFKB1P19838 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.33□□□□□ -1.24
NFKB1P19838 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.33□□□□□ -1.24
NFKB1P19838 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.33□□□□□ -1.24
NFKB1P19838 RPSAP32-201ENST00000432681 526 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms