Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NCK1P16333 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.28□□□□□ -1.56
NCK1P16333 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.28□□□□□ -1.56
NCK1P16333 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NCK1P16333 RNU6-167P-201ENST00000384292 106 ntBASIC5.28□□□□□ -1.56
NCK1P16333 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.28□□□□□ -1.56
NCK1P16333 RPS6P23-201ENST00000413224 722 ntBASIC5.28□□□□□ -1.56
NCK1P16333 PRUNEP1-201ENST00000425846 705 ntBASIC5.28□□□□□ -1.56
NCK1P16333 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 AL136231.1-201ENST00000429407 730 ntBASIC5.28□□□□□ -1.56
NCK1P16333 EIF5AP4-201ENST00000441206 465 ntBASIC5.28□□□□□ -1.56
NCK1P16333 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.28□□□□□ -1.56
NCK1P16333 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCK1P16333 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 CBX1P2-201ENST00000453841 458 ntBASIC5.28□□□□□ -1.56
NCK1P16333 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.28□□□□□ -1.56
NCK1P16333 AP002371.1-201ENST00000463604 433 ntBASIC5.28□□□□□ -1.56
NCK1P16333 RPL5P16-201ENST00000471467 790 ntBASIC5.28□□□□□ -1.56
NCK1P16333 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 RPL32P33-201ENST00000487023 394 ntBASIC5.28□□□□□ -1.56
NCK1P16333 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NCK1P16333 USP9YP2-201ENST00000504503 1000 ntBASIC5.28□□□□□ -1.56
NCK1P16333 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.28□□□□□ -1.56
NCK1P16333 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 GUSBP9-201ENST00000510138 584 ntBASIC5.28□□□□□ -1.56
NCK1P16333 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.28□□□□□ -1.56
NCK1P16333 USP9YP1-201ENST00000513521 1002 ntBASIC5.28□□□□□ -1.56
NCK1P16333 TRIM51DP-201ENST00000529746 596 ntBASIC5.28□□□□□ -1.56
NCK1P16333 OR5AM1P-201ENST00000532136 1032 ntBASIC5.28□□□□□ -1.56
NCK1P16333 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.28□□□□□ -1.56
NCK1P16333 AL078601.3-201ENST00000573303 535 ntBASIC5.28□□□□□ -1.56
NCK1P16333 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.28□□□□□ -1.56
NCK1P16333 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.28□□□□□ -1.56
NCK1P16333 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.28□□□□□ -1.56
NCK1P16333 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCK1P16333 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.28□□□□□ -1.56
NCK1P16333 AL357140.4-201ENST00000636827 412 ntBASIC5.28□□□□□ -1.56
NCK1P16333 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NCK1P16333 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCK1P16333 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCK1P16333 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCK1P16333 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 AL513548.1-201ENST00000562904 1724 ntBASIC5.28□□□□□ -1.56
NCK1P16333 CUL4AP1-201ENST00000514750 1863 ntBASIC5.28□□□□□ -1.56
NCK1P16333 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.28□□□□□ -1.56
NCK1P16333 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NCK1P16333 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.28□□□□□ -1.56
NCK1P16333 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.28□□□□□ -1.56
NCK1P16333 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NCK1P16333 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NCK1P16333 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NCK1P16333 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NCK1P16333 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
NCK1P16333 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NCK1P16333 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NCK1P16333 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NCK1P16333 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NCK1P16333 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NCK1P16333 AC027088.4-201ENST00000611559 1947 ntBASIC5.27□□□□□ -1.57
NCK1P16333 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NCK1P16333 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.27□□□□□ -1.57
NCK1P16333 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NCK1P16333 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NCK1P16333 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NCK1P16333 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NCK1P16333 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NCK1P16333 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NCK1P16333 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NCK1P16333 MIR130B-202ENST00000385018 82 ntBASIC5.27□□□□□ -1.57
NCK1P16333 YWHAZP6-201ENST00000399764 738 ntBASIC5.27□□□□□ -1.57
NCK1P16333 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.27□□□□□ -1.57
NCK1P16333 MRPL53P1-201ENST00000414323 319 ntBASIC5.27□□□□□ -1.57
NCK1P16333 CAP1P2-201ENST00000417455 1409 ntBASIC5.27□□□□□ -1.57
NCK1P16333 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.27□□□□□ -1.57
NCK1P16333 RNF10P1-201ENST00000418589 369 ntBASIC5.27□□□□□ -1.57
NCK1P16333 RPL7P56-201ENST00000429441 717 ntBASIC5.27□□□□□ -1.57
NCK1P16333 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.27□□□□□ -1.57
NCK1P16333 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.27□□□□□ -1.57
NCK1P16333 RPS10P18-201ENST00000442662 495 ntBASIC5.27□□□□□ -1.57
NCK1P16333 AC005077.1-201ENST00000449226 375 ntBASIC5.27□□□□□ -1.57
NCK1P16333 ATP5LP5-201ENST00000483050 299 ntBASIC5.27□□□□□ -1.57
NCK1P16333 NPM1P28-201ENST00000492269 840 ntBASIC5.27□□□□□ -1.57
NCK1P16333 RN7SL57P-201ENST00000493687 290 ntBASIC5.27□□□□□ -1.57
NCK1P16333 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NCK1P16333 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.27□□□□□ -1.57
NCK1P16333 AC092709.1-201ENST00000521355 1045 ntBASIC5.27□□□□□ -1.57
NCK1P16333 CASP1P2-201ENST00000526830 1258 ntBASIC5.27□□□□□ -1.57
NCK1P16333 AC130364.2-201ENST00000528639 604 ntBASIC5.27□□□□□ -1.57
NCK1P16333 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.27□□□□□ -1.57
NCK1P16333 AC006530.1-201ENST00000555980 571 ntBASIC5.27□□□□□ -1.57
NCK1P16333 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.27□□□□□ -1.57
NCK1P16333 RN7SL290P-201ENST00000578661 300 ntBASIC5.27□□□□□ -1.57
NCK1P16333 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms