Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 SNORA48.7-201ENST00000391302 135 ntBASIC3.39□□□□□ -1.87
PKHD1P08F94 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PKHD1P08F94 snoU13.22-201ENST00000459428 104 ntBASIC3.39□□□□□ -1.87
PKHD1P08F94 GTF2F2P1-201ENST00000511083 675 ntBASIC3.39□□□□□ -1.87
PKHD1P08F94 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.39□□□□□ -1.87
PKHD1P08F94 AP001880.2-201ENST00000538233 448 ntBASIC3.39□□□□□ -1.87
PKHD1P08F94 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC3.39□□□□□ -1.87
PKHD1P08F94 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.39□□□□□ -1.87
PKHD1P08F94 AC099494.2-201ENST00000623371 978 ntBASIC3.39□□□□□ -1.87
PKHD1P08F94 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PKHD1P08F94 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PKHD1P08F94 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PKHD1P08F94 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC3.38□□□□□ -1.87
PKHD1P08F94 AC006600.2-201ENST00000624834 2506 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 AL008638.3-201ENST00000623027 5182 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 RAD17P2-201ENST00000451754 1977 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PKHD1P08F94 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 FP325330.3-201ENST00000623760 9537 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 RPS3AP23-201ENST00000401762 784 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 RPL17P36-201ENST00000420302 549 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 AURKAPS2-201ENST00000454983 333 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.38□□□□□ -1.87
PKHD1P08F94 HMGN2P25-201ENST00000486956 268 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 CR381572.2-201ENST00000624852 397 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC3.38□□□□□ -1.87
PKHD1P08F94 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC3.38□□□□□ -1.87
PKHD1P08F94 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 AL589993.1-201ENST00000407450 2524 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 OLMALINC-203ENST00000641087 3779 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
PKHD1P08F94 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 HSPD1P7-201ENST00000447985 1686 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 THAP12P9-201ENST00000503971 2360 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC3.38□□□□□ -1.87
PKHD1P08F94 HMGB3P7-201ENST00000400214 611 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PKHD1P08F94 TMA16P2-201ENST00000413187 601 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 NIP7P2-201ENST00000485801 544 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 AC090058.1-201ENST00000498788 435 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.38□□□□□ -1.87
PKHD1P08F94 AC021483.2-201ENST00000567415 758 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.38□□□□□ -1.87
PKHD1P08F94 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.38□□□□□ -1.87
PKHD1P08F94 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 AC010928.1-201ENST00000592477 1447 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC3.38□□□□□ -1.87
PKHD1P08F94 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC3.38□□□□□ -1.87
PKHD1P08F94 AC007996.1-201ENST00000620414 2821 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PKHD1P08F94 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PKHD1P08F94 AC025750.1-201ENST00000399891 379 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 ST13P16-201ENST00000401760 781 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.38□□□□□ -1.87
PKHD1P08F94 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.38□□□□□ -1.87
PKHD1P08F94 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.38□□□□□ -1.87
PKHD1P08F94 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.38□□□□□ -1.87
PKHD1P08F94 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.38□□□□□ -1.87
PKHD1P08F94 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.38□□□□□ -1.87
PKHD1P08F94 MYLK-221ENST00000583087 678 ntTSL 4 BASIC3.38□□□□□ -1.87
PKHD1P08F94 AL356218.2-201ENST00000605264 187 ntBASIC3.38□□□□□ -1.87
PKHD1P08F94 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKHD1P08F94 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKHD1P08F94 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms