Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SFTPBP07988 AC009879.1-201ENST00000520029 839 ntBASIC5.14□□□□□ -1.59
SFTPBP07988 AC136777.2-201ENST00000522979 358 ntBASIC5.14□□□□□ -1.59
SFTPBP07988 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.14□□□□□ -1.59
SFTPBP07988 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.14□□□□□ -1.59
SFTPBP07988 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.14□□□□□ -1.59
SFTPBP07988 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.14□□□□□ -1.59
SFTPBP07988 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.14□□□□□ -1.59
SFTPBP07988 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.14□□□□□ -1.59
SFTPBP07988 AC009268.1-201ENST00000561352 1203 ntBASIC5.14□□□□□ -1.59
SFTPBP07988 AC027281.1-201ENST00000574178 758 ntBASIC5.14□□□□□ -1.59
SFTPBP07988 AC002069.2-201ENST00000603580 883 ntBASIC5.14□□□□□ -1.59
SFTPBP07988 AL451049.1-201ENST00000608672 497 ntBASIC5.14□□□□□ -1.59
SFTPBP07988 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.14□□□□□ -1.59
SFTPBP07988 AL356608.1-201ENST00000610034 820 ntBASIC5.14□□□□□ -1.59
SFTPBP07988 AC015922.4-201ENST00000612568 690 ntBASIC5.14□□□□□ -1.59
SFTPBP07988 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SFTPBP07988 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SFTPBP07988 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.14□□□□□ -1.59
SFTPBP07988 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.14□□□□□ -1.59
SFTPBP07988 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.14□□□□□ -1.59
SFTPBP07988 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SFTPBP07988 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.14□□□□□ -1.59
SFTPBP07988 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.14□□□□□ -1.59
SFTPBP07988 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SFTPBP07988 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SFTPBP07988 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.13□□□□□ -1.59
SFTPBP07988 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.13□□□□□ -1.59
SFTPBP07988 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
SFTPBP07988 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.13□□□□□ -1.59
SFTPBP07988 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 AL161756.3-201ENST00000641216 2071 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 RNA5SP110-201ENST00000362638 115 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 RNU105B-201ENST00000364478 208 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 RNA5SP156-201ENST00000410250 110 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 RNU6-564P-201ENST00000410983 104 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.13□□□□□ -1.59
SFTPBP07988 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.13□□□□□ -1.59
SFTPBP07988 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.13□□□□□ -1.59
SFTPBP07988 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.13□□□□□ -1.59
SFTPBP07988 AC007064.3-201ENST00000422608 359 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 USP24P1-201ENST00000433802 779 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 CUBNP2-201ENST00000443534 1139 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 AC144530.1-201ENST00000452862 555 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 OSTCP1-201ENST00000455507 450 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.13□□□□□ -1.59
SFTPBP07988 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
SFTPBP07988 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.13□□□□□ -1.59
SFTPBP07988 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SFTPBP07988 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.13□□□□□ -1.59
SFTPBP07988 OR7E99P-201ENST00000505750 922 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
SFTPBP07988 AP002981.1-201ENST00000517692 975 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SFTPBP07988 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.13□□□□□ -1.59
SFTPBP07988 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.13□□□□□ -1.59
SFTPBP07988 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.13□□□□□ -1.59
SFTPBP07988 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.13□□□□□ -1.59
SFTPBP07988 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.13□□□□□ -1.59
SFTPBP07988 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.13□□□□□ -1.59
SFTPBP07988 AC007346.1-201ENST00000569208 867 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 LINC00556-201ENST00000569603 412 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.13□□□□□ -1.59
SFTPBP07988 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.13□□□□□ -1.59
SFTPBP07988 AC119403.2-201ENST00000590960 598 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.13□□□□□ -1.59
SFTPBP07988 AC020915.5-201ENST00000596836 964 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 AC073333.2-201ENST00000603589 769 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 AC092681.3-201ENST00000609463 678 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 BX323046.1-201ENST00000610145 535 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.13□□□□□ -1.59
SFTPBP07988 RFPL4AP6-201ENST00000616792 846 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 AF117829.2-201ENST00000619538 361 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.13□□□□□ -1.59
SFTPBP07988 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.13□□□□□ -1.59
SFTPBP07988 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.13□□□□□ -1.59
SFTPBP07988 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.13□□□□□ -1.59
SFTPBP07988 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.13□□□□□ -1.59
SFTPBP07988 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SFTPBP07988 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SFTPBP07988 QRSL1P1-201ENST00000400977 1540 ntBASIC5.13□□□□□ -1.59
SFTPBP07988 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SFTPBP07988 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SFTPBP07988 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.12□□□□□ -1.59
SFTPBP07988 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.12□□□□□ -1.59
SFTPBP07988 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SFTPBP07988 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms