Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RN7SL290P-201ENST00000578661 300 ntBASIC4.78□□□□□ -1.64
CD74P04233 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.78□□□□□ -1.64
CD74P04233 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 AL080312.2-201ENST00000613001 630 ntBASIC4.78□□□□□ -1.64
CD74P04233 AL021918.2-201ENST00000613415 194 ntBASIC4.78□□□□□ -1.64
CD74P04233 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.78□□□□□ -1.64
CD74P04233 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 AC103703.1-201ENST00000634783 663 ntBASIC4.78□□□□□ -1.64
CD74P04233 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CD74P04233 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.78□□□□□ -1.64
CD74P04233 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 TET1P1-201ENST00000426627 2301 ntBASIC4.78□□□□□ -1.64
CD74P04233 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CD74P04233 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD74P04233 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
CD74P04233 THAP12P5-201ENST00000405864 2275 ntBASIC4.77□□□□□ -1.65
CD74P04233 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.77□□□□□ -1.65
CD74P04233 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.77□□□□□ -1.65
CD74P04233 TCP1P3-201ENST00000414406 1498 ntBASIC4.77□□□□□ -1.65
CD74P04233 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 AL031595.2-201ENST00000624215 19071 ntBASIC4.77□□□□□ -1.65
CD74P04233 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CD74P04233 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CD74P04233 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CD74P04233 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CD74P04233 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.77□□□□□ -1.65
CD74P04233 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 RNA5SP110-201ENST00000362638 115 ntBASIC4.77□□□□□ -1.65
CD74P04233 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CD74P04233 MIR188-201ENST00000385034 86 ntBASIC4.77□□□□□ -1.65
CD74P04233 SNORA48.4-201ENST00000391089 134 ntBASIC4.77□□□□□ -1.65
CD74P04233 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 OOSP1-201ENST00000398992 1270 ntBASIC4.77□□□□□ -1.65
CD74P04233 EI24P3-201ENST00000399046 1062 ntBASIC4.77□□□□□ -1.65
CD74P04233 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CD74P04233 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.77□□□□□ -1.65
CD74P04233 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CD74P04233 AL031681.1-201ENST00000443304 400 ntBASIC4.77□□□□□ -1.65
CD74P04233 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.77□□□□□ -1.65
CD74P04233 RPS7P10-201ENST00000464254 603 ntBASIC4.77□□□□□ -1.65
CD74P04233 AC017007.3-201ENST00000479865 435 ntBASIC4.77□□□□□ -1.65
CD74P04233 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.77□□□□□ -1.65
CD74P04233 RPL12P30-201ENST00000488389 499 ntBASIC4.77□□□□□ -1.65
CD74P04233 AL049874.2-201ENST00000492636 288 ntBASIC4.77□□□□□ -1.65
CD74P04233 USP9YP2-201ENST00000504503 1000 ntBASIC4.77□□□□□ -1.65
CD74P04233 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.77□□□□□ -1.65
CD74P04233 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.77□□□□□ -1.65
CD74P04233 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.77□□□□□ -1.65
CD74P04233 USP9YP1-201ENST00000513521 1002 ntBASIC4.77□□□□□ -1.65
CD74P04233 AC138517.1-201ENST00000515724 568 ntBASIC4.77□□□□□ -1.65
CD74P04233 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.77□□□□□ -1.65
CD74P04233 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.77□□□□□ -1.65
CD74P04233 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.77□□□□□ -1.65
CD74P04233 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.77□□□□□ -1.65
CD74P04233 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.77□□□□□ -1.65
CD74P04233 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.77□□□□□ -1.65
CD74P04233 AGGF1P7-201ENST00000562369 913 ntBASIC4.77□□□□□ -1.65
CD74P04233 MIR4732-201ENST00000581873 76 ntBASIC4.77□□□□□ -1.65
CD74P04233 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.77□□□□□ -1.65
CD74P04233 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.77□□□□□ -1.65
CD74P04233 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.77□□□□□ -1.65
CD74P04233 RPSAP75-201ENST00000605848 301 ntBASIC4.77□□□□□ -1.65
CD74P04233 AC009779.8-202ENST00000607990 932 ntBASIC4.77□□□□□ -1.65
CD74P04233 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.77□□□□□ -1.65
CD74P04233 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.77□□□□□ -1.65
CD74P04233 AC007603.3-201ENST00000636915 979 ntBASIC4.77□□□□□ -1.65
CD74P04233 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.77□□□□□ -1.65
CD74P04233 ADAM5-202ENST00000399789 1942 ntBASIC4.77□□□□□ -1.65
CD74P04233 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CD74P04233 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
CD74P04233 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.77□□□□□ -1.65
CD74P04233 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD74P04233 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.77□□□□□ -1.65
CD74P04233 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD74P04233 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD74P04233 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.76□□□□□ -1.65
CD74P04233 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD74P04233 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CD74P04233 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD74P04233 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms