Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RNA5SP228-201ENST00000516232 133 ntBASIC6.59□□□□□ -1.35
COL4A1P02462 YWHABP2-201ENST00000540201 713 ntBASIC6.59□□□□□ -1.35
COL4A1P02462 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A1P02462 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A1P02462 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A1P02462 AC016745.2-201ENST00000608834 3443 ntBASIC6.59□□□□□ -1.35
COL4A1P02462 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A1P02462 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A1P02462 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A1P02462 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A1P02462 AC114774.1-201ENST00000507410 1770 ntBASIC6.59□□□□□ -1.35
COL4A1P02462 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.59□□□□□ -1.35
COL4A1P02462 MALAT1-202ENST00000534336 8708 ntBASIC6.59□□□□□ -1.35
COL4A1P02462 CASC19-281ENST00000642118 1554 ntBASIC6.59□□□□□ -1.35
COL4A1P02462 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
COL4A1P02462 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A1P02462 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A1P02462 AC009962.1-201ENST00000567327 3813 ntBASIC6.59□□□□□ -1.35
COL4A1P02462 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.59□□□□□ -1.36
COL4A1P02462 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL4A1P02462 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
COL4A1P02462 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
COL4A1P02462 RPL26P29-201ENST00000415623 438 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 AC104837.2-201ENST00000427236 424 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A1P02462 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.58□□□□□ -1.36
COL4A1P02462 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.58□□□□□ -1.36
COL4A1P02462 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
COL4A1P02462 AC092754.1-201ENST00000472975 479 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 ATP5LP5-201ENST00000483050 299 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A1P02462 AC004980.4-201ENST00000513375 203 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 AC092593.2-201ENST00000513866 913 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 RN7SKP66-201ENST00000516681 231 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 AC137768.1-201ENST00000549998 553 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.58□□□□□ -1.36
COL4A1P02462 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A1P02462 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.58□□□□□ -1.36
COL4A1P02462 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.58□□□□□ -1.36
COL4A1P02462 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
COL4A1P02462 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A1P02462 AC144833.1-201ENST00000567953 4089 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
COL4A1P02462 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
COL4A1P02462 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
COL4A1P02462 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.58□□□□□ -1.36
COL4A1P02462 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
COL4A1P02462 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A1P02462 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A1P02462 AC079753.1-201ENST00000623243 3868 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A1P02462 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A1P02462 RNA5SP123-201ENST00000363244 119 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 CYB5AP4-201ENST00000396692 399 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 AC211486.3-201ENST00000412694 621 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A1P02462 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.58□□□□□ -1.36
COL4A1P02462 BX679664.2-201ENST00000439282 283 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 RN7SL423P-201ENST00000486202 304 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 AC108043.1-201ENST00000512696 574 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 RN7SKP147-201ENST00000517154 244 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.58□□□□□ -1.36
COL4A1P02462 MIR4480-201ENST00000582492 71 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A1P02462 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
COL4A1P02462 AC009163.6-201ENST00000612367 342 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A1P02462 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A1P02462 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A1P02462 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
COL4A1P02462 AL034546.1-201ENST00000623740 3693 ntBASIC6.58□□□□□ -1.36
COL4A1P02462 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
COL4A1P02462 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
COL4A1P02462 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 AC092747.4-201ENST00000620519 1861 ntBASIC6.57□□□□□ -1.36
COL4A1P02462 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A1P02462 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A1P02462 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.57□□□□□ -1.36
COL4A1P02462 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A1P02462 RNGTTP1-201ENST00000420965 728 ntBASIC6.57□□□□□ -1.36
COL4A1P02462 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL4A1P02462 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.57□□□□□ -1.36
COL4A1P02462 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A1P02462 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.57□□□□□ -1.36
COL4A1P02462 AL645937.3-201ENST00000453647 936 ntBASIC6.57□□□□□ -1.36
COL4A1P02462 Z92846.1-201ENST00000456203 268 ntBASIC6.57□□□□□ -1.36
COL4A1P02462 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.57□□□□□ -1.36
COL4A1P02462 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
COL4A1P02462 AC095055.1-201ENST00000603472 1113 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms