Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.77□□□□□ -1.65
UPK1BO75841 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.77□□□□□ -1.65
UPK1BO75841 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.77□□□□□ -1.65
UPK1BO75841 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.77□□□□□ -1.65
UPK1BO75841 H3F3BP2-201ENST00000583907 357 ntBASIC4.77□□□□□ -1.65
UPK1BO75841 AL353600.1-201ENST00000608148 251 ntBASIC4.77□□□□□ -1.65
UPK1BO75841 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.77□□□□□ -1.65
UPK1BO75841 MIR8069-1-201ENST00000616627 86 ntBASIC4.77□□□□□ -1.65
UPK1BO75841 MIR8069-2-201ENST00000621412 86 ntBASIC4.77□□□□□ -1.65
UPK1BO75841 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.77□□□□□ -1.65
UPK1BO75841 AL596275.2-207ENST00000641188 675 ntBASIC4.77□□□□□ -1.65
UPK1BO75841 AL596275.2-204ENST00000641628 552 ntBASIC4.77□□□□□ -1.65
UPK1BO75841 AL596275.2-206ENST00000641957 626 ntBASIC4.77□□□□□ -1.65
UPK1BO75841 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1BO75841 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1BO75841 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.77□□□□□ -1.65
UPK1BO75841 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1BO75841 MUC2-202ENST00000613187 4845 ntBASIC4.77□□□□□ -1.65
UPK1BO75841 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
UPK1BO75841 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
UPK1BO75841 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
UPK1BO75841 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1BO75841 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1BO75841 CASC19-246ENST00000641625 1606 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1BO75841 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1BO75841 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1BO75841 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
UPK1BO75841 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1BO75841 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1BO75841 EEF1GP6-201ENST00000402309 905 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 AL132875.1-201ENST00000403623 949 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC4.76□□□□□ -1.65
UPK1BO75841 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.76□□□□□ -1.65
UPK1BO75841 Z68694.1-201ENST00000413929 841 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 NIFKP3-201ENST00000417799 865 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.76□□□□□ -1.65
UPK1BO75841 AL358176.3-201ENST00000420757 454 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 OSTCP4-201ENST00000424397 449 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC4.76□□□□□ -1.65
UPK1BO75841 NPM1P22-201ENST00000427761 952 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 TRIM60P16-201ENST00000444048 694 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 OR2L9P-201ENST00000444456 913 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 COX4I1P2-201ENST00000447446 547 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 AL450023.1-201ENST00000450868 751 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 AL358876.1-201ENST00000453364 1075 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.76□□□□□ -1.65
UPK1BO75841 AC114982.2-201ENST00000461396 358 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 RPS20P23-201ENST00000461683 354 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.76□□□□□ -1.65
UPK1BO75841 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.76□□□□□ -1.65
UPK1BO75841 RN7SL413P-201ENST00000482700 297 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 AC138409.2-202ENST00000507274 458 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 IGLVI-70-201ENST00000523272 390 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.76□□□□□ -1.65
UPK1BO75841 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.76□□□□□ -1.65
UPK1BO75841 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC4.76□□□□□ -1.65
UPK1BO75841 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
UPK1BO75841 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 OR4C49P-201ENST00000563891 900 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 AL021918.2-201ENST00000613415 194 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC4.76□□□□□ -1.65
UPK1BO75841 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 MIR6834-201ENST00000622807 81 ntBASIC4.76□□□□□ -1.65
UPK1BO75841 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1BO75841 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1BO75841 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
UPK1BO75841 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.76□□□□□ -1.65
UPK1BO75841 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
UPK1BO75841 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
UPK1BO75841 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1BO75841 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.75□□□□□ -1.65
UPK1BO75841 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1BO75841 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.75□□□□□ -1.65
UPK1BO75841 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.75□□□□□ -1.65
UPK1BO75841 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1BO75841 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1BO75841 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPK1BO75841 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
UPK1BO75841 OR9G4-201ENST00000302957 984 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
UPK1BO75841 SELENOWP1-201ENST00000322792 252 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 MIR614-201ENST00000385082 90 ntBASIC4.75□□□□□ -1.65
UPK1BO75841 AC003045.1-201ENST00000398779 713 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms