Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GPC4O75487 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.86□□□□□ -1.47
GPC4O75487 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
GPC4O75487 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.86□□□□□ -1.47
GPC4O75487 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 RNA5SP211-201ENST00000365516 117 ntBASIC5.86□□□□□ -1.47
GPC4O75487 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 NPM1P38-201ENST00000403835 865 ntBASIC5.86□□□□□ -1.47
GPC4O75487 AL354868.1-201ENST00000417077 482 ntBASIC5.86□□□□□ -1.47
GPC4O75487 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.86□□□□□ -1.47
GPC4O75487 AMYP1-201ENST00000440059 1023 ntBASIC5.86□□□□□ -1.47
GPC4O75487 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.86□□□□□ -1.47
GPC4O75487 GEMIN2P1-201ENST00000454246 752 ntBASIC5.86□□□□□ -1.47
GPC4O75487 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 AC068228.1-201ENST00000461723 211 ntBASIC5.86□□□□□ -1.47
GPC4O75487 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.86□□□□□ -1.47
GPC4O75487 AC098847.1-201ENST00000473094 348 ntBASIC5.86□□□□□ -1.47
GPC4O75487 AC079080.1-201ENST00000479841 822 ntBASIC5.86□□□□□ -1.47
GPC4O75487 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.86□□□□□ -1.47
GPC4O75487 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.86□□□□□ -1.47
GPC4O75487 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.86□□□□□ -1.47
GPC4O75487 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.86□□□□□ -1.47
GPC4O75487 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.86□□□□□ -1.47
GPC4O75487 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.86□□□□□ -1.47
GPC4O75487 CYCSP38-201ENST00000559840 322 ntBASIC5.86□□□□□ -1.47
GPC4O75487 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.86□□□□□ -1.47
GPC4O75487 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.86□□□□□ -1.47
GPC4O75487 AC005244.1-201ENST00000582566 339 ntBASIC5.86□□□□□ -1.47
GPC4O75487 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 AC090236.2-201ENST00000587933 1101 ntBASIC5.86□□□□□ -1.47
GPC4O75487 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.86□□□□□ -1.47
GPC4O75487 AC007620.3-201ENST00000608131 497 ntBASIC5.86□□□□□ -1.47
GPC4O75487 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 uc_338.26-201ENST00000612659 160 ntBASIC5.86□□□□□ -1.47
GPC4O75487 AL590410.1-201ENST00000617925 333 ntBASIC5.86□□□□□ -1.47
GPC4O75487 AC245014.3-201ENST00000618589 347 ntBASIC5.86□□□□□ -1.47
GPC4O75487 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 SNX18P12-201ENST00000624821 759 ntBASIC5.86□□□□□ -1.47
GPC4O75487 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
GPC4O75487 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.86□□□□□ -1.47
GPC4O75487 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
GPC4O75487 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 AC138907.8-201ENST00000623981 2256 ntBASIC5.86□□□□□ -1.47
GPC4O75487 AC005224.3-201ENST00000584683 2140 ntBASIC5.86□□□□□ -1.47
GPC4O75487 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GPC4O75487 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.86□□□□□ -1.47
GPC4O75487 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
GPC4O75487 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.85□□□□□ -1.47
GPC4O75487 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
GPC4O75487 CASC19-238ENST00000641523 1558 ntBASIC5.85□□□□□ -1.47
GPC4O75487 LYARP1-201ENST00000436977 1501 ntBASIC5.85□□□□□ -1.47
GPC4O75487 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
GPC4O75487 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.85□□□□□ -1.47
GPC4O75487 AC004076.2-201ENST00000620532 3323 ntBASIC5.85□□□□□ -1.47
GPC4O75487 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GPC4O75487 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GPC4O75487 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
GPC4O75487 RNFT1P3-201ENST00000340898 1052 ntBASIC5.85□□□□□ -1.47
GPC4O75487 AC107977.1-201ENST00000355745 939 ntBASIC5.85□□□□□ -1.47
GPC4O75487 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
GPC4O75487 AL139039.2-201ENST00000407436 479 ntBASIC5.85□□□□□ -1.47
GPC4O75487 AC098592.2-201ENST00000413158 265 ntBASIC5.85□□□□□ -1.47
GPC4O75487 METTL15P3-201ENST00000415522 1221 ntBASIC5.85□□□□□ -1.47
GPC4O75487 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.85□□□□□ -1.47
GPC4O75487 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.85□□□□□ -1.47
GPC4O75487 RPL24P2-201ENST00000421023 475 ntBASIC5.85□□□□□ -1.47
GPC4O75487 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.85□□□□□ -1.47
GPC4O75487 AL445928.1-201ENST00000435545 222 ntBASIC5.85□□□□□ -1.47
GPC4O75487 ATP5LP2-201ENST00000440646 311 ntBASIC5.85□□□□□ -1.47
GPC4O75487 RPS7P3-201ENST00000443360 580 ntBASIC5.85□□□□□ -1.47
GPC4O75487 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.85□□□□□ -1.47
GPC4O75487 NPM1P28-201ENST00000492269 840 ntBASIC5.85□□□□□ -1.47
GPC4O75487 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.85□□□□□ -1.47
GPC4O75487 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.85□□□□□ -1.47
GPC4O75487 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.85□□□□□ -1.47
GPC4O75487 AC138409.2-202ENST00000507274 458 ntBASIC5.85□□□□□ -1.47
GPC4O75487 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.85□□□□□ -1.47
GPC4O75487 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GPC4O75487 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.85□□□□□ -1.47
GPC4O75487 RNA5SP340-201ENST00000517132 107 ntBASIC5.85□□□□□ -1.47
GPC4O75487 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.85□□□□□ -1.47
GPC4O75487 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.85□□□□□ -1.47
GPC4O75487 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.85□□□□□ -1.47
GPC4O75487 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms