Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM38O00635 RN7SKP157-201ENST00000516174 282 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM38O00635 AP000620.1-201ENST00000527147 504 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM38O00635 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM38O00635 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC008521.2-201ENST00000591021 259 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 MTCO2P22-201ENST00000603246 681 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC004801.6-201ENST00000616571 978 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 AP006248.3-201ENST00000623580 594 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM38O00635 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
TRIM38O00635 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM38O00635 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC018717.1-201ENST00000457712 1505 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 AL136984.1-201ENST00000607611 1893 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM38O00635 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM38O00635 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM38O00635 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
TRIM38O00635 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM38O00635 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
TRIM38O00635 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM38O00635 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM38O00635 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM38O00635 RNA5SP346-201ENST00000363541 121 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
TRIM38O00635 SLC20A1P1-201ENST00000413906 956 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 NENFP1-201ENST00000419476 466 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 CYP4F30P-202ENST00000420048 405 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 PTP4A1P1-201ENST00000420539 515 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM38O00635 IGLV3-4-201ENST00000432300 244 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM38O00635 AC023141.3-201ENST00000436698 278 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 AL391987.1-201ENST00000441025 200 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 AC079922.1-201ENST00000443291 359 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM38O00635 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM38O00635 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM38O00635 AC098847.1-201ENST00000473094 348 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 LARP7P4-201ENST00000481075 878 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 AL158068.1-201ENST00000506116 616 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM38O00635 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.19□□□□□ -1.42
TRIM38O00635 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM38O00635 DUX4L52-201ENST00000549363 777 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM38O00635 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM38O00635 AC090616.1-201ENST00000583895 447 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 AC005332.4-201ENST00000592752 579 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
TRIM38O00635 MTCO3P22-201ENST00000603219 784 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 AC018754.1-201ENST00000607486 925 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 AC084782.3-201ENST00000612282 578 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM38O00635 AC106858.1-201ENST00000637497 429 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM38O00635 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM38O00635 BIN2P1-201ENST00000504996 1530 ntBASIC6.19□□□□□ -1.42
TRIM38O00635 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM38O00635 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM38O00635 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM38O00635 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM38O00635 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM38O00635 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TRIM38O00635 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM38O00635 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
TRIM38O00635 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
TRIM38O00635 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms