Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TVP23AA6NH52 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TVP23AA6NH52 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TVP23AA6NH52 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TVP23AA6NH52 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TVP23AA6NH52 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TVP23AA6NH52 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TVP23AA6NH52 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 PDZK1P1-202ENST00000425209 1350 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AL121886.1-201ENST00000358609 435 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 SNORA70.6-201ENST00000383934 134 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 AC005042.1-201ENST00000393397 800 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 BX284632.2-201ENST00000421091 399 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 TMEM183AP1-205ENST00000432739 290 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 AMYP1-201ENST00000440059 1023 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 AL512605.1-202ENST00000441919 381 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 AL359955.2-201ENST00000445380 353 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 AC023271.1-201ENST00000445936 1090 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 RNU7-157P-201ENST00000459600 66 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 AC068228.1-201ENST00000461723 211 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 RPL32P33-201ENST00000487023 394 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AC084121.1-201ENST00000533882 835 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AC007956.1-201ENST00000555623 542 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 AL845552.1-201ENST00000556820 323 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AP001437.1-201ENST00000608783 456 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 MIR6793-201ENST00000612376 63 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 CASC19-274ENST00000642018 970 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 LYARP1-201ENST00000436977 1501 ntBASIC5.05□□□□□ -1.6
TVP23AA6NH52 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.05□□□□□ -1.6
TVP23AA6NH52 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
TVP23AA6NH52 AL034546.1-201ENST00000623740 3693 ntBASIC5.04□□□□□ -1.6
TVP23AA6NH52 NAMPTP1-201ENST00000440465 2514 ntBASIC5.04□□□□□ -1.6
TVP23AA6NH52 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
TVP23AA6NH52 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TVP23AA6NH52 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TVP23AA6NH52 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TVP23AA6NH52 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TVP23AA6NH52 AC144833.1-201ENST00000567953 4089 ntBASIC5.04□□□□□ -1.6
TVP23AA6NH52 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TVP23AA6NH52 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
TVP23AA6NH52 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
TVP23AA6NH52 RNA5SP500-201ENST00000364486 119 ntBASIC5.04□□□□□ -1.6
TVP23AA6NH52 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.04□□□□□ -1.6
TVP23AA6NH52 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TVP23AA6NH52 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
TVP23AA6NH52 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
TVP23AA6NH52 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.04□□□□□ -1.6
TVP23AA6NH52 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.04□□□□□ -1.6
TVP23AA6NH52 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.04□□□□□ -1.6
TVP23AA6NH52 MED28P3-201ENST00000444288 531 ntBASIC5.04□□□□□ -1.6
TVP23AA6NH52 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.04□□□□□ -1.6
TVP23AA6NH52 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.04□□□□□ -1.6
TVP23AA6NH52 RN7SL197P-201ENST00000466981 299 ntBASIC5.04□□□□□ -1.6
TVP23AA6NH52 AL122020.1-201ENST00000472287 459 ntBASIC5.04□□□□□ -1.6
TVP23AA6NH52 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.04□□□□□ -1.6
TVP23AA6NH52 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.04□□□□□ -1.6
TVP23AA6NH52 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms