Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 SUMO2P15-201ENST00000604285 278 ntBASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 AC000068.2-201ENST00000608816 460 ntBASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 CASC19-264ENST00000641912 1184 ntBASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 AL359955.1-201ENST00000455242 3275 ntBASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMIM28A0A1B0GU29 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AL121886.1-201ENST00000358609 435 ntBASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AC092106.1-201ENST00000444291 373 ntBASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 COPS8P2-201ENST00000473228 627 ntBASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 RN7SKP99-201ENST00000517028 307 ntBASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AC060780.2-201ENST00000589047 198 ntBASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 MIR6837-201ENST00000620884 64 ntBASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AC136428.4-201ENST00000634254 1155 ntBASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AC034229.2-201ENST00000566945 2508 ntBASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AL158152.1-201ENST00000602652 1435 ntBASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 AC235565.1-201ENST00000456962 1325 ntBASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.98□□□□□ -1.45
SMIM28A0A1B0GU29 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 MIR1286-201ENST00000408112 78 ntBASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 RPL35AP24-201ENST00000413846 330 ntBASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 METTL15P3-201ENST00000415522 1221 ntBASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 BMS1P13-201ENST00000417301 885 ntBASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 ATP5LP5-201ENST00000483050 299 ntBASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 MIR1269B-201ENST00000580405 75 ntBASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 H3F3BP2-201ENST00000583907 357 ntBASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms