Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 HMGB1P42-201ENST00000532126 553 ntBASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 AL162574.1-201ENST00000615702 950 ntBASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 FO681491.1-202ENST00000623392 737 ntBASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 AC087565.3-203ENST00000641018 837 ntBASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 AC130360.2-201ENST00000533477 1556 ntBASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 AC083899.1-201ENST00000454465 3819 ntBASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAV27A0A087WT01 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 SAMMSON-210ENST00000641260 1308 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AL162456.1-201ENST00000634535 2006 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 OR7E101P-201ENST00000400428 513 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 GPS2P1-201ENST00000411761 986 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AC245060.4-201ENST00000413293 1121 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AC009506.2-201ENST00000420635 840 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 NME1P1-201ENST00000420914 382 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 NPM1P25-201ENST00000429734 854 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 TAAR4P-201ENST00000454843 1039 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AC087672.1-201ENST00000479876 766 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 EIF4E2P2-201ENST00000492033 736 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AC021106.1-201ENST00000509020 1058 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 SEPT10P1-201ENST00000517342 1162 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AC060775.1-201ENST00000518241 520 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 MRPS16P1-201ENST00000523462 412 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 H3F3BP2-201ENST00000583907 357 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 RN7SL544P-201ENST00000617232 284 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 RN7SL763P-201ENST00000620922 284 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 AC025262.3-201ENST00000623666 360 ntBASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRAV27A0A087WT01 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRAV27A0A087WT01 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TRAV27A0A087WT01 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRAV27A0A087WT01 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC007161.1-204ENST00000423039 460 ntBASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5□□□□□ -1.61
TRAV27A0A087WT01 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms