Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHB1Q9Y5F3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 CCNT2P1-201ENST00000423082 1315 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC006511.3-201ENST00000624929 1783 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 RPL22P22-201ENST00000395439 379 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AP002784.2-201ENST00000397300 549 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 SNORA79B-201ENST00000410557 148 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 CBX1P3-201ENST00000413296 527 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC007568.1-201ENST00000422912 471 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 SETP20-201ENST00000457046 852 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC021146.5-201ENST00000503544 545 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 RNA5SP418-201ENST00000515951 117 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 TPRX1P1-201ENST00000557620 319 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC010735.1-201ENST00000567305 1026 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC012146.2-201ENST00000576545 416 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AP000919.1-202ENST00000581139 1264 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AL606834.3-201ENST00000602615 496 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC067773.1-201ENST00000603284 1094 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 SNORA74.4-201ENST00000607595 199 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AL008723.3-201ENST00000608926 449 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 CYCSP41-201ENST00000616920 296 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 AC105105.5-201ENST00000622635 1294 ntBASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHB1Q9Y5F3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 KARSP1-201ENST00000451871 1752 ntBASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 MAPK10-287ENST00000641217 3037 ntBASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 AC090220.1-201ENST00000593078 1699 ntBASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 SNORA70H-201ENST00000383910 135 ntBASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 SNORA70J-201ENST00000384182 135 ntBASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 RNU6-298P-201ENST00000390888 96 ntBASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 AL391422.1-201ENST00000402155 436 ntBASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 NPM1P38-201ENST00000403835 865 ntBASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 RNU2-17P-201ENST00000410290 190 ntBASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 RPS26P13-201ENST00000419030 330 ntBASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 OR2L9P-201ENST00000444456 913 ntBASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCDHB1Q9Y5F3 MTND2P8-201ENST00000450555 1025 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms