Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 GTF2IP4-201ENST00000453092 2054 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AC117409.1-201ENST00000470499 1310 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 KYNUP3-201ENST00000574386 1341 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 RNU11-201ENST00000387069 134 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 GAPDHP48-201ENST00000436626 961 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 RPL12P39-201ENST00000455456 496 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AC105384.2-201ENST00000508433 640 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 UGT2A3P7-201ENST00000510485 734 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AC130364.2-201ENST00000528639 604 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 HMGN2P36-201ENST00000529541 409 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AP000648.1-201ENST00000529682 397 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AL360012.1-201ENST00000602813 131 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AL031601.1-201ENST00000605702 394 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AC140479.2-201ENST00000421567 3130 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 AC123769.1-201ENST00000530992 3192 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 WDR95P-201ENST00000425638 1542 ntBASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ATG4BQ9Y4P1 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 MTCO1P22-201ENST00000604619 1360 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 RNA5SP91-201ENST00000390902 119 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 NPM1P37-201ENST00000403105 874 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AL357752.1-201ENST00000412817 349 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC019205.1-201ENST00000421830 730 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AL035660.1-201ENST00000422041 222 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 DEFB109A-201ENST00000482450 265 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC139365.2-201ENST00000517972 253 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC092121.1-201ENST00000569452 202 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC060766.1-201ENST00000590824 627 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC027243.2-201ENST00000602530 724 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 AC022919.1-201ENST00000624979 626 ntBASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.47□□□□□ -1.53
ATG4BQ9Y4P1 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
ATG4BQ9Y4P1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
ATG4BQ9Y4P1 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms