Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC096632.2-201ENST00000438139 1239 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC122718.1-201ENST00000439448 744 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC002553.1-201ENST00000442828 802 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 KATNBL1P6-201ENST00000453433 915 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 NDUFB4P1-201ENST00000462398 381 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 FAM133DP-201ENST00000464802 691 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 TAAR3P-201ENST00000466706 1078 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC079944.1-201ENST00000485426 495 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC109486.1-201ENST00000486833 374 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 PDCL3P4-201ENST00000489621 720 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 MTND6P8-201ENST00000503471 522 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC114786.3-201ENST00000509304 705 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 HMGB3P13-201ENST00000511263 607 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 SCARNA6-201ENST00000515982 265 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 OR5AZ1P-201ENST00000527448 943 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 GLYATL1P4-201ENST00000529326 906 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AP004247.1-201ENST00000531556 1289 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 ATP5J2P4-201ENST00000538774 267 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC037479.1-201ENST00000558361 625 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 BMS1P8-201ENST00000565049 1178 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC092325.1-201ENST00000566449 554 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC004232.1-201ENST00000571388 208 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 EIF4A3P1-201ENST00000578499 647 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 WBP1LP12-201ENST00000604449 331 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC093635.1-201ENST00000609028 555 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC097505.1-201ENST00000610199 565 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC025253.1-201ENST00000613623 543 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC068234.2-201ENST00000619646 522 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AL607023.1-201ENST00000620045 248 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC095031.1-201ENST00000623685 672 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC110769.3-201ENST00000624567 1173 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 TNPO1P2-201ENST00000426249 2665 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC007342.7-201ENST00000624610 2337 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
SSU72Q9NP77 AC122713.2-201ENST00000624942 3335 ntBASIC6.88□□□□□ -1.31
SSU72Q9NP77 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSU72Q9NP77 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
SSU72Q9NP77 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSU72Q9NP77 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
SSU72Q9NP77 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSU72Q9NP77 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSU72Q9NP77 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSU72Q9NP77 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSU72Q9NP77 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SSU72Q9NP77 AL137100.1-201ENST00000556703 1620 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSU72Q9NP77 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSU72Q9NP77 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSU72Q9NP77 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSU72Q9NP77 RNA5SP188-201ENST00000362916 129 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 RNU6-560P-201ENST00000364007 108 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSU72Q9NP77 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.87□□□□□ -1.31
SSU72Q9NP77 MIR152-201ENST00000385212 87 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 MSRB1P1-201ENST00000396851 354 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 AL512430.2-201ENST00000406786 339 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 VN1R33P-201ENST00000411800 887 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 HMGB3P31-201ENST00000413333 595 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SSU72Q9NP77 OR5P4P-201ENST00000424698 917 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.87□□□□□ -1.31
SSU72Q9NP77 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.87□□□□□ -1.31
SSU72Q9NP77 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.87□□□□□ -1.31
SSU72Q9NP77 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC6.87□□□□□ -1.31
SSU72Q9NP77 VN1R34P-201ENST00000447387 883 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 FGF7P6-202ENST00000451282 293 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 AC093799.1-201ENST00000452411 499 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 RPL21P134-201ENST00000453468 483 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 RPL34P22-201ENST00000468193 318 ntBASIC6.87□□□□□ -1.31
SSU72Q9NP77 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms