Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
SSX3Q99909 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SSX3Q99909 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX3Q99909 RNU6-564P-201ENST00000410983 104 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 TRIM60P17-201ENST00000415181 719 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX3Q99909 AJ239321.1-201ENST00000424255 564 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX3Q99909 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX3Q99909 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX3Q99909 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX3Q99909 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX3Q99909 VN1R38P-201ENST00000450265 887 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX3Q99909 RN7SL284P-201ENST00000498823 275 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 SNX18P24-201ENST00000505249 671 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 AC091874.2-201ENST00000505889 720 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX3Q99909 HMGN1P17-201ENST00000513734 295 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 ZNF519P4-201ENST00000514008 125 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 MAST4-IT1-201ENST00000514241 658 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 HSD3BP3-201ENST00000514706 994 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX3Q99909 IGKV1D-22-201ENST00000518953 324 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 IGHV4-55-201ENST00000520889 368 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.12□□□□□ -1.59
SSX3Q99909 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 AC008147.3-201ENST00000548666 354 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX3Q99909 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.12□□□□□ -1.59
SSX3Q99909 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX3Q99909 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 RN7SL475P-201ENST00000583379 298 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.12□□□□□ -1.59
SSX3Q99909 AC025857.2-201ENST00000602711 238 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 AC022387.2-201ENST00000604050 448 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX3Q99909 AC016911.1-201ENST00000613297 452 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 AL356274.1-201ENST00000617064 410 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 AL121890.2-201ENST00000617644 465 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX3Q99909 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX3Q99909 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SSX3Q99909 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX3Q99909 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX3Q99909 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX3Q99909 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 AL359955.1-201ENST00000455242 3275 ntBASIC5.12□□□□□ -1.59
SSX3Q99909 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SSX3Q99909 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 RNA5SP453-201ENST00000362503 119 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX3Q99909 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SSX3Q99909 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX3Q99909 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX3Q99909 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SSX3Q99909 AL157702.1-201ENST00000398764 426 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 GCNT1P4-201ENST00000404096 329 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AL139039.2-201ENST00000407436 479 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 MTND4LP13-201ENST00000425022 298 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 AC022022.1-201ENST00000430304 178 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 IGLV3-4-201ENST00000432300 244 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 PSMD10P2-201ENST00000432890 672 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX3Q99909 RPL5P7-201ENST00000444235 813 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX3Q99909 AC010240.2-201ENST00000445363 1205 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX3Q99909 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.11□□□□□ -1.59
SSX3Q99909 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX3Q99909 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX3Q99909 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX3Q99909 AC093719.1-201ENST00000480427 441 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
SSX3Q99909 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.11□□□□□ -1.59
SSX3Q99909 KHDC1P1-201ENST00000511053 508 ntBASIC5.11□□□□□ -1.59
SSX3Q99909 RNA5SP206-201ENST00000516703 121 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms