Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RPL5P7-201ENST00000444235 813 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 OR52E7P-201ENST00000452394 933 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 AL133351.3-201ENST00000454998 193 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 AC093827.1-201ENST00000480094 861 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 AC093719.1-201ENST00000480427 441 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 RPL12P30-201ENST00000488389 499 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 AC093890.1-201ENST00000502554 540 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 HSD3BP3-201ENST00000514706 994 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 AC084121.1-201ENST00000533882 835 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 AL121579.2-201ENST00000555466 590 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 MIR4502-201ENST00000580432 81 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 AL356274.1-201ENST00000617064 410 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 AC021106.3-201ENST00000623925 531 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 AC073593.1-201ENST00000624500 411 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VMP1Q96GC9 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VMP1Q96GC9 AC092692.1-201ENST00000623625 2595 ntBASIC5.84□□□□□ -1.47
VMP1Q96GC9 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VMP1Q96GC9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.84□□□□□ -1.47
VMP1Q96GC9 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
VMP1Q96GC9 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.84□□□□□ -1.48
VMP1Q96GC9 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.84□□□□□ -1.48
VMP1Q96GC9 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
VMP1Q96GC9 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VMP1Q96GC9 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 GVINP1-202ENST00000531871 7271 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VMP1Q96GC9 RNU6-670P-201ENST00000364312 104 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 AL034403.1-201ENST00000399414 885 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 RPSAP65-201ENST00000429660 595 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 UBE2V2P3-201ENST00000433562 437 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 Z85994.2-201ENST00000434327 452 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 AC010240.2-201ENST00000445363 1205 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 RANP2-201ENST00000456833 229 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VMP1Q96GC9 RN7SL170P-201ENST00000487098 295 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 RFPL4AP5-201ENST00000514977 504 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 RN7SKP70-201ENST00000516655 271 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 AC011853.1-201ENST00000518911 454 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VMP1Q96GC9 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 AL845552.1-201ENST00000556820 323 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 AC002310.3-201ENST00000569728 723 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 DYNLL1P1-201ENST00000595442 269 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 AC006924.1-201ENST00000610750 559 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
VMP1Q96GC9 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VMP1Q96GC9 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VMP1Q96GC9 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VMP1Q96GC9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VMP1Q96GC9 AL121950.1-201ENST00000624993 2077 ntBASIC5.83□□□□□ -1.48
VMP1Q96GC9 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
VMP1Q96GC9 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VMP1Q96GC9 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VMP1Q96GC9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VMP1Q96GC9 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VMP1Q96GC9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VMP1Q96GC9 AC110792.3-201ENST00000595906 1614 ntBASIC5.82□□□□□ -1.48
VMP1Q96GC9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VMP1Q96GC9 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VMP1Q96GC9 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
VMP1Q96GC9 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VMP1Q96GC9 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
VMP1Q96GC9 AC240504.1-201ENST00000395709 845 ntBASIC5.82□□□□□ -1.48
VMP1Q96GC9 CYP4F30P-202ENST00000420048 405 ntBASIC5.82□□□□□ -1.48
VMP1Q96GC9 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.82□□□□□ -1.48
VMP1Q96GC9 RPS7P14-201ENST00000426405 583 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms