Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.71□□□□□ -1.34
HPS3Q969F9 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HPS3Q969F9 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HPS3Q969F9 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
HPS3Q969F9 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HPS3Q969F9 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HPS3Q969F9 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HPS3Q969F9 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HPS3Q969F9 AC016583.1-201ENST00000624221 2431 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HPS3Q969F9 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HPS3Q969F9 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HPS3Q969F9 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.7□□□□□ -1.34
HPS3Q969F9 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HPS3Q969F9 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.7□□□□□ -1.34
HPS3Q969F9 RNU1-134P-201ENST00000362935 165 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 RNU6-792P-201ENST00000363490 107 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 RNU105B-201ENST00000364478 208 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
HPS3Q969F9 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HPS3Q969F9 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HPS3Q969F9 ATP5F1P6-201ENST00000402768 767 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AL121835.1-201ENST00000404250 354 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 RSL24D1P1-201ENST00000404972 493 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 RPL35AP31-201ENST00000418340 337 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 SFR1P2-201ENST00000421841 730 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.7□□□□□ -1.34
HPS3Q969F9 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HPS3Q969F9 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.7□□□□□ -1.34
HPS3Q969F9 AL512637.2-201ENST00000431287 1256 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 MRPL50P1-201ENST00000431951 384 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AL138787.1-202ENST00000437804 898 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AL353662.1-201ENST00000439099 327 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 H3F3BP1-201ENST00000440551 403 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.7□□□□□ -1.34
HPS3Q969F9 RAB28P2-201ENST00000454299 641 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 RN7SL352P-201ENST00000466002 277 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 RPSAP37-201ENST00000470913 821 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AC124945.1-201ENST00000485133 188 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AC021087.2-201ENST00000504656 1203 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AL158068.1-201ENST00000506116 616 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.7□□□□□ -1.34
HPS3Q969F9 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.7□□□□□ -1.34
HPS3Q969F9 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.7□□□□□ -1.34
HPS3Q969F9 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.7□□□□□ -1.34
HPS3Q969F9 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.7□□□□□ -1.34
HPS3Q969F9 OR1AB1P-201ENST00000585564 761 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.7□□□□□ -1.34
HPS3Q969F9 AC068768.2-201ENST00000602352 343 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AC124916.2-201ENST00000604416 224 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AC026979.4-201ENST00000606555 645 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AC104763.3-201ENST00000613765 618 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 AL591926.1-201ENST00000620542 217 ntBASIC6.7□□□□□ -1.34
HPS3Q969F9 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HPS3Q969F9 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HPS3Q969F9 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
HPS3Q969F9 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HPS3Q969F9 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.7□□□□□ -1.34
HPS3Q969F9 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.7□□□□□ -1.34
HPS3Q969F9 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.69□□□□□ -1.34
HPS3Q969F9 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HPS3Q969F9 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HPS3Q969F9 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AC083837.1-201ENST00000565297 2994 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HPS3Q969F9 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
HPS3Q969F9 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
HPS3Q969F9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.69□□□□□ -1.34
HPS3Q969F9 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
HPS3Q969F9 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HPS3Q969F9 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HPS3Q969F9 TCP1P3-201ENST00000414406 1498 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
HPS3Q969F9 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.69□□□□□ -1.34
HPS3Q969F9 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.69□□□□□ -1.34
HPS3Q969F9 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HPS3Q969F9 OR10R3P-201ENST00000361688 942 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HPS3Q969F9 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.69□□□□□ -1.34
HPS3Q969F9 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.69□□□□□ -1.34
HPS3Q969F9 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.69□□□□□ -1.34
HPS3Q969F9 FTLP8-201ENST00000446770 267 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 RPL23AP60-201ENST00000450011 454 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 SDC4P-201ENST00000453285 601 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AC021006.1-201ENST00000489849 553 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.69□□□□□ -1.34
HPS3Q969F9 CYP4F27P-201ENST00000514557 494 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 RFPL4AP3-201ENST00000515267 345 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 RNU6-334P-201ENST00000517072 102 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AC008429.4-201ENST00000521201 182 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 UBTFL9-201ENST00000534504 1148 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 AC244502.2-201ENST00000543361 851 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms