Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL512652.1-201ENST00000619006 500 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AL445528.2-201ENST00000620582 470 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AP003476.1-201ENST00000623984 516 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC106754.1-201ENST00000562632 1513 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 RN7SKP128-201ENST00000364270 303 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 MIR188-201ENST00000385034 86 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 SNRPEP6-201ENST00000407465 277 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 USP12PY-201ENST00000427677 1064 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC096632.2-201ENST00000438139 1239 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC004854.1-201ENST00000440356 349 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 FTLP8-201ENST00000446770 267 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 RPL31P20-201ENST00000449593 360 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 FRG2FP-204ENST00000453982 852 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 RPL12P39-201ENST00000455456 496 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 RN7SL552P-201ENST00000462094 276 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 GUSBP9-201ENST00000510138 584 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC113191.1-201ENST00000517759 403 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 IGKV2-19-201ENST00000518132 283 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC078899.1-201ENST00000521432 1185 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 C1DP5-201ENST00000525775 383 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 NPIPB14P-203ENST00000532298 987 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC126615.2-201ENST00000553003 515 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC007346.2-201ENST00000564816 892 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC233266.2-201ENST00000567067 528 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 MRPS21P8-201ENST00000569196 235 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC010547.7-201ENST00000570323 333 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC073333.2-201ENST00000603589 769 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC005899.6-201ENST00000620729 297 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC073342.3-201ENST00000624211 193 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AL109659.3-201ENST00000624985 950 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC007603.3-201ENST00000636915 979 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AC010325.3-201ENST00000641084 394 ntBASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
ATG4AQ8WYN0 AL645568.2-201ENST00000432815 1337 ntBASIC6.15□□□□□ -1.43
ATG4AQ8WYN0 AL929601.4-201ENST00000613011 1341 ntBASIC6.15□□□□□ -1.43
ATG4AQ8WYN0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ATG4AQ8WYN0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.15□□□□□ -1.43
ATG4AQ8WYN0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
ATG4AQ8WYN0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
ATG4AQ8WYN0 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.15□□□□□ -1.43
ATG4AQ8WYN0 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ATG4AQ8WYN0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
ATG4AQ8WYN0 AC004076.2-201ENST00000620532 3323 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 DNM1P47-203ENST00000571780 12667 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 CXADRP1-201ENST00000398098 1095 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 RNA5SP198-201ENST00000410376 127 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC106883.1-201ENST00000418805 562 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 RPL12P12-201ENST00000424633 501 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 MTND2P21-201ENST00000436242 1042 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC023141.3-201ENST00000436698 278 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AL663074.2-201ENST00000440621 479 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 RPSAP40-201ENST00000442343 891 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC097359.1-201ENST00000447946 463 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 RSU1P1-201ENST00000453416 441 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 PFN1P6-201ENST00000476786 399 ntBASIC6.14□□□□□ -1.43
ATG4AQ8WYN0 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms