Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMIM11BQ8TCY0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SMIM11BQ8TCY0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMIM11BQ8TCY0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC3.55□□□□□ -1.84
SMIM11BQ8TCY0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMIM11BQ8TCY0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SMIM11BQ8TCY0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMIM11BQ8TCY0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMIM11BQ8TCY0 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC097063.1-201ENST00000426714 1797 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 RNA5SP85-201ENST00000365378 119 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC092634.1-201ENST00000366505 199 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 RPL10P10-201ENST00000403509 664 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AL009179.1-201ENST00000406085 265 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 RN7SKP97-201ENST00000410966 333 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 SETP15-201ENST00000412724 337 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AL357752.1-201ENST00000412817 349 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 RPS6P23-201ENST00000413224 722 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 RPL22P11-201ENST00000434894 385 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC010086.1-201ENST00000437359 1052 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 TUBB4BP6-201ENST00000437576 479 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 RPS7P4-201ENST00000444127 582 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 PRELID1P3-201ENST00000450055 643 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 RN7SL83P-201ENST00000468131 297 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC092865.4-201ENST00000477936 615 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 RPL12P30-201ENST00000488389 499 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC025283.1-201ENST00000572039 734 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 MIR6849-201ENST00000618543 69 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 AL512652.1-201ENST00000619006 500 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 MT-RNR2-201ENST00000387347 1559 ntBASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SMIM11BQ8TCY0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 TET1P1-201ENST00000426627 2301 ntBASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 AC083843.2-201ENST00000568248 6253 ntBASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 GAPDHP24-201ENST00000328713 983 ntBASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 RNU1-19P-201ENST00000363306 165 ntBASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 RNA5SP77-201ENST00000365394 120 ntBASIC3.53□□□□□ -1.84
SMIM11BQ8TCY0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms