Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 VN1R21P-201ENST00000426703 765 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AL136455.1-201ENST00000441083 1240 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 RPS23P9-201ENST00000448848 438 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC023194.2-201ENST00000465398 406 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 RPS7P6-201ENST00000485777 579 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 OR7E157P-201ENST00000494376 911 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 HSD3BP3-201ENST00000514706 994 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 GAPDHP62-201ENST00000515313 990 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC139365.2-201ENST00000517972 253 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 WBP1LP3-201ENST00000523033 208 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC084824.2-201ENST00000548906 345 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC008126.1-201ENST00000549019 480 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 RPA2P1-201ENST00000556557 721 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AL122125.1-201ENST00000616999 600 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC245014.3-201ENST00000618589 347 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC117409.1-201ENST00000470499 1310 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 TTC39DP-201ENST00000416781 1688 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 MRRFP1-201ENST00000435941 1675 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC104966.1-201ENST00000467010 1464 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC027088.4-201ENST00000611559 1947 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 RNU1-146P-201ENST00000364015 165 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 RNU1-136P-201ENST00000384181 164 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 MRPL53P1-201ENST00000414323 319 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC138761.5-201ENST00000433967 325 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC009963.3-201ENST00000458090 486 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC099521.1-201ENST00000482557 334 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 RN7SL193P-201ENST00000491708 276 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC092349.1-201ENST00000504903 310 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AL136131.3-201ENST00000607600 188 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC015712.7-201ENST00000615211 635 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC074140.1-201ENST00000621617 208 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 AC092111.2-201ENST00000611627 1414 ntBASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLHC1Q8NHS4 GVINP1-202ENST00000531871 7271 ntBASIC5.46□□□□□ -1.53
CLHC1Q8NHS4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLHC1Q8NHS4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms