Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
NPAS3Q8IXF0 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS3Q8IXF0 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.76□□□□□ -1.17
NPAS3Q8IXF0 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS3Q8IXF0 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS3Q8IXF0 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
NPAS3Q8IXF0 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS3Q8IXF0 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS3Q8IXF0 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS3Q8IXF0 AL512353.3-201ENST00000417517 1326 ntBASIC7.76□□□□□ -1.17
NPAS3Q8IXF0 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.76□□□□□ -1.17
NPAS3Q8IXF0 HSPD1P1-201ENST00000503199 1726 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC011155.1-201ENST00000316512 456 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 MIR548P-201ENST00000408336 84 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 CBX3P6-201ENST00000430257 527 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC006480.1-201ENST00000449887 378 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC140076.1-201ENST00000449897 361 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 OR6C5P-201ENST00000452388 923 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 RN7SL392P-201ENST00000473024 299 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 RPL7P18-201ENST00000478965 734 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 MTND1P3-201ENST00000484956 952 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC015864.1-201ENST00000496512 544 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 Y_RNA.704-201ENST00000516851 102 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AP003084.1-201ENST00000524828 742 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 OR7K1P-201ENST00000546439 926 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 uc_338.21-201ENST00000622458 147 ntBASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NPAS3Q8IXF0 AL080317.3-201ENST00000607434 4315 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 SNORD56.2-201ENST00000363242 71 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 RNA5SP238-201ENST00000365464 120 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 MIR498-201ENST00000385134 124 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 MTCO3P40-201ENST00000392516 676 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 HMGB3P23-201ENST00000414981 585 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC069157.1-201ENST00000421749 137 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC134879.1-201ENST00000426062 394 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC027124.1-201ENST00000440852 466 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms