Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 TOMM20P1-201ENST00000534518 427 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 RNU4ATAC-201ENST00000580972 127 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC008507.3-201ENST00000585753 472 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC005229.3-201ENST00000603438 323 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC105105.5-201ENST00000622635 1294 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AL662795.2-201ENST00000624252 3706 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NUP54Q7Z3B4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NUP54Q7Z3B4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.59□□□□□ -1.52
NUP54Q7Z3B4 AL121839.2-201ENST00000565058 6943 ntBASIC5.59□□□□□ -1.52
NUP54Q7Z3B4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NUP54Q7Z3B4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.59□□□□□ -1.52
NUP54Q7Z3B4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.59□□□□□ -1.52
NUP54Q7Z3B4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.52
NUP54Q7Z3B4 AL121950.1-201ENST00000624993 2077 ntBASIC5.59□□□□□ -1.52
NUP54Q7Z3B4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 IFIT1P1-201ENST00000400497 1449 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AL354854.1-201ENST00000455940 1363 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 TRIM51GP-201ENST00000534741 1350 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC144833.1-201ENST00000567953 4089 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 RNA5SP433-201ENST00000364491 114 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 RNU4-7P-201ENST00000364758 141 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 NPM1P37-201ENST00000403105 874 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 RN7SKP166-201ENST00000410812 305 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 PTCD2P2-201ENST00000415579 1095 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC245884.2-201ENST00000426257 404 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 ATP5LP2-201ENST00000440646 311 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AL512593.1-201ENST00000444758 779 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC016027.4-201ENST00000450866 277 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AL133244.1-201ENST00000456007 258 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 Z83838.1-202ENST00000456225 839 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC007688.1-201ENST00000475592 759 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC093827.1-201ENST00000480094 861 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 SNORA70.17-201ENST00000516449 133 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 IGKV3D-25-201ENST00000519599 235 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AP003396.4-201ENST00000527574 265 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC009268.1-201ENST00000561352 1203 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC119403.2-201ENST00000590960 598 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC068768.2-201ENST00000602352 343 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC022387.2-201ENST00000604050 448 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC012467.1-201ENST00000607740 256 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC004801.6-201ENST00000616571 978 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AL121890.2-201ENST00000617644 465 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC245014.3-201ENST00000618589 347 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC021422.1-201ENST00000621212 473 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms