Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 RAD17P2-201ENST00000451754 1977 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 U3.3-201ENST00000362986 216 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 KCTD10P1-201ENST00000434203 625 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 AC022034.3-201ENST00000471393 478 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 AC058823.1-201ENST00000485315 474 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 AC005341.1-201ENST00000571086 708 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 TVP23CP2-201ENST00000571473 623 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 AL391262.1-201ENST00000556558 1992 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 THAP12P9-201ENST00000503971 2360 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 CDC27P1-201ENST00000445384 715 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC005000.1-201ENST00000536192 288 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 AL445423.1-201ENST00000609941 536 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 AP000547.3-204ENST00000588548 2523 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 HMGB3P7-201ENST00000400214 611 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 RNA5SP251-201ENST00000410614 137 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 HMGN2P25-201ENST00000486956 268 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC093720.1-201ENST00000505681 714 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC074255.1-201ENST00000511259 501 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC006600.2-201ENST00000624834 2506 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 TRBV5-2-201ENST00000489095 273 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC111000.3-201ENST00000508057 576 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 SCARNA20.4-201ENST00000516969 131 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC103792.1-201ENST00000603591 919 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC020765.1-201ENST00000604296 328 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 MIR8089-201ENST00000620165 82 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC114774.1-201ENST00000507410 1770 ntBASIC4.37□□□□□ -1.71
VPS13CQ709C8 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
VPS13CQ709C8 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS13CQ709C8 EFHC1-201ENST00000371068 6987 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 RNU4-2-201ENST00000365668 141 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms