Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SNAPC4Q5SXM2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.02□□□□□ -0.96
SNAPC4Q5SXM2 RN7SKP149-201ENST00000363008 344 ntBASIC9.02□□□□□ -0.96
SNAPC4Q5SXM2 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC9.02□□□□□ -0.96
SNAPC4Q5SXM2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC9.02□□□□□ -0.96
SNAPC4Q5SXM2 AC068587.1-201ENST00000483613 781 ntBASIC9.02□□□□□ -0.96
SNAPC4Q5SXM2 PDCL3P4-201ENST00000489621 720 ntBASIC9.02□□□□□ -0.96
SNAPC4Q5SXM2 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC9.02□□□□□ -0.96
SNAPC4Q5SXM2 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC9.02□□□□□ -0.96
SNAPC4Q5SXM2 HMGB1P44-201ENST00000508597 572 ntBASIC9.02□□□□□ -0.96
SNAPC4Q5SXM2 OR7H2P-201ENST00000513483 306 ntBASIC9.02□□□□□ -0.96
SNAPC4Q5SXM2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC9.02□□□□□ -0.96
SNAPC4Q5SXM2 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 AC114876.1-201ENST00000490962 1366 ntBASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 AC116036.1-201ENST00000412199 367 ntBASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 AL161722.1-201ENST00000446972 1032 ntBASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 AL672138.1-201ENST00000450604 1015 ntBASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 RPL7P16-201ENST00000479738 738 ntBASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 OR5AN2P-201ENST00000534535 896 ntBASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 AL627230.1-201ENST00000613077 211 ntBASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 AL591926.8-201ENST00000616876 211 ntBASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC9.02□□□□□ -0.97
SNAPC4Q5SXM2 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 MIPEPP2-201ENST00000422560 1819 ntBASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 AC006511.3-201ENST00000624929 1783 ntBASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 AL133482.1-201ENST00000415988 498 ntBASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 GSTM5P1-201ENST00000434751 660 ntBASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 AL513533.1-201ENST00000453728 415 ntBASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 MIR5096-201ENST00000583713 70 ntBASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 AC104687.2-201ENST00000604442 342 ntBASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC9.01□□□□□ -0.97
SNAPC4Q5SXM2 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 AC132825.1-201ENST00000463573 2247 ntBASIC9□□□□□ -0.97
SNAPC4Q5SXM2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 AC007161.1-204ENST00000423039 460 ntBASIC9□□□□□ -0.97
SNAPC4Q5SXM2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 AC009127.1-201ENST00000467090 155 ntBASIC9□□□□□ -0.97
SNAPC4Q5SXM2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 AL161616.1-201ENST00000611867 286 ntBASIC9□□□□□ -0.97
SNAPC4Q5SXM2 MAPK10-371ENST00000641952 5209 ntBASIC9□□□□□ -0.97
SNAPC4Q5SXM2 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 AC008124.1-201ENST00000609803 9730 ntBASIC9□□□□□ -0.97
SNAPC4Q5SXM2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
SNAPC4Q5SXM2 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNAPC4Q5SXM2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
SNAPC4Q5SXM2 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms