Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AP005431.1-201ENST00000618479 319 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3AP84243 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.12□□□□□ -1.59
H3F3AP84243 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
H3F3AP84243 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3AP84243 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
H3F3AP84243 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3AP84243 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
H3F3AP84243 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3AP84243 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.11□□□□□ -1.59
H3F3AP84243 AL034546.1-201ENST00000623740 3693 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
H3F3AP84243 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3AP84243 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
H3F3AP84243 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3AP84243 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3AP84243 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
H3F3AP84243 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.11□□□□□ -1.59
H3F3AP84243 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.11□□□□□ -1.59
H3F3AP84243 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3AP84243 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3AP84243 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
H3F3AP84243 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
H3F3AP84243 SNORA64.1-201ENST00000362600 132 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.11□□□□□ -1.59
H3F3AP84243 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
H3F3AP84243 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3AP84243 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.11□□□□□ -1.59
H3F3AP84243 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3AP84243 KCTD9P1-201ENST00000430462 1167 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.11□□□□□ -1.59
H3F3AP84243 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3AP84243 HMGB3P24-201ENST00000433260 622 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3AP84243 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.11□□□□□ -1.59
H3F3AP84243 PCNPP2-201ENST00000441651 455 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 RPS23P6-201ENST00000466136 431 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 RPS7P6-201ENST00000485777 579 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 ST13P12-201ENST00000508958 1094 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 AC136777.2-201ENST00000522979 358 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 IGKV2-4-201ENST00000523070 340 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3AP84243 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.11□□□□□ -1.59
H3F3AP84243 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
H3F3AP84243 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.11□□□□□ -1.59
H3F3AP84243 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3AP84243 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
H3F3AP84243 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3AP84243 AP001496.3-201ENST00000580230 913 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 AC025857.2-201ENST00000602711 238 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3AP84243 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3AP84243 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.11□□□□□ -1.59
H3F3AP84243 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.11□□□□□ -1.59
H3F3AP84243 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3AP84243 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3AP84243 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
H3F3AP84243 AL442128.2-201ENST00000620246 1824 ntBASIC5.11□□□□□ -1.59
H3F3AP84243 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
H3F3AP84243 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.11□□□□□ -1.59
H3F3AP84243 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3AP84243 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.1□□□□□ -1.59
H3F3AP84243 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.1□□□□□ -1.59
H3F3AP84243 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3AP84243 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
H3F3AP84243 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3AP84243 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3AP84243 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3AP84243 RNA5SP394-201ENST00000364216 119 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 RN7SKP292-201ENST00000365522 317 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 RNA5SP30-201ENST00000365552 115 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3AP84243 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
H3F3AP84243 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3AP84243 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3AP84243 RNF10P1-201ENST00000418589 369 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 AC079807.1-201ENST00000429993 481 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.1□□□□□ -1.59
H3F3AP84243 RPL23AP19-201ENST00000436229 369 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3AP84243 MEMO1P4-201ENST00000453590 386 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.1□□□□□ -1.59
H3F3AP84243 AC007998.1-201ENST00000474156 672 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 NPM1P28-201ENST00000492269 840 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 DUTP1-201ENST00000493631 470 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3AP84243 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3AP84243 PSMA2P2-201ENST00000504319 686 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 SNORD46.2-201ENST00000516021 102 ntBASIC5.1□□□□□ -1.59
H3F3AP84243 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.1□□□□□ -1.59
H3F3AP84243 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms