Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CCNA1P78396 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNA1P78396 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNA1P78396 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CCNA1P78396 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.57□□□□□ -1.36
CCNA1P78396 NIFKP3-201ENST00000417799 865 ntBASIC6.57□□□□□ -1.36
CCNA1P78396 SLC35E1P1-201ENST00000419313 864 ntBASIC6.57□□□□□ -1.36
CCNA1P78396 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.57□□□□□ -1.36
CCNA1P78396 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.57□□□□□ -1.36
CCNA1P78396 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.57□□□□□ -1.36
CCNA1P78396 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNA1P78396 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 AC231760.1-201ENST00000498002 260 ntBASIC6.57□□□□□ -1.36
CCNA1P78396 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNA1P78396 AP006245.2-201ENST00000522004 300 ntBASIC6.57□□□□□ -1.36
CCNA1P78396 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNA1P78396 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNA1P78396 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNA1P78396 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNA1P78396 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNA1P78396 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNA1P78396 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.57□□□□□ -1.36
CCNA1P78396 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CCNA1P78396 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.57□□□□□ -1.36
CCNA1P78396 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNA1P78396 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CCNA1P78396 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNA1P78396 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CCNA1P78396 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNA1P78396 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CCNA1P78396 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.56□□□□□ -1.36
CCNA1P78396 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.56□□□□□ -1.36
CCNA1P78396 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.56□□□□□ -1.36
CCNA1P78396 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.56□□□□□ -1.36
CCNA1P78396 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.56□□□□□ -1.36
CCNA1P78396 AC130304.1-201ENST00000622942 2385 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.56□□□□□ -1.36
CCNA1P78396 RNA5SP234-201ENST00000363916 119 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.56□□□□□ -1.36
CCNA1P78396 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.56□□□□□ -1.36
CCNA1P78396 AC007568.1-201ENST00000422912 471 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCNA1P78396 AC006455.6-201ENST00000426192 893 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 AL139148.1-201ENST00000427122 680 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 CYCSP12-201ENST00000437729 300 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.56□□□□□ -1.36
CCNA1P78396 CNOT7P2-201ENST00000441051 832 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 AC004815.1-201ENST00000484185 331 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.56□□□□□ -1.36
CCNA1P78396 RPS26P24-201ENST00000497656 331 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.56□□□□□ -1.36
CCNA1P78396 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.56□□□□□ -1.36
CCNA1P78396 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.56□□□□□ -1.36
CCNA1P78396 AC005229.3-201ENST00000603438 323 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 AL121612.2-201ENST00000612261 482 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 AC004836.1-201ENST00000623032 634 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 AC132068.1-201ENST00000623805 459 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCNA1P78396 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNA1P78396 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.56□□□□□ -1.36
CCNA1P78396 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNA1P78396 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
CCNA1P78396 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.56□□□□□ -1.36
CCNA1P78396 ZNF402P-201ENST00000404435 3100 ntBASIC6.56□□□□□ -1.36
CCNA1P78396 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCNA1P78396 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCNA1P78396 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNA1P78396 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCNA1P78396 AC025470.1-201ENST00000510053 2032 ntBASIC6.55□□□□□ -1.36
CCNA1P78396 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.55□□□□□ -1.36
CCNA1P78396 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
CCNA1P78396 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CCNA1P78396 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.55□□□□□ -1.36
CCNA1P78396 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCNA1P78396 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCNA1P78396 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCNA1P78396 RN7SKP28-201ENST00000364770 305 ntBASIC6.55□□□□□ -1.36
CCNA1P78396 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCNA1P78396 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCNA1P78396 AL353626.3-201ENST00000413399 657 ntBASIC6.55□□□□□ -1.36
CCNA1P78396 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.55□□□□□ -1.36
CCNA1P78396 RPL7P45-201ENST00000455851 743 ntBASIC6.55□□□□□ -1.36
CCNA1P78396 RN7SL329P-201ENST00000467740 299 ntBASIC6.55□□□□□ -1.36
CCNA1P78396 AC073610.1-201ENST00000489971 396 ntBASIC6.55□□□□□ -1.36
CCNA1P78396 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.55□□□□□ -1.36
CCNA1P78396 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.55□□□□□ -1.36
CCNA1P78396 AC021146.10-201ENST00000515628 706 ntBASIC6.55□□□□□ -1.36
CCNA1P78396 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.55□□□□□ -1.36
CCNA1P78396 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.55□□□□□ -1.36
CCNA1P78396 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCNA1P78396 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms