Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC005277.2-201ENST00000617898 390 ntBASIC6.52□□□□□ -1.37
GABREP78334 AC139769.3-201ENST00000618383 175 ntBASIC6.52□□□□□ -1.37
GABREP78334 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.52□□□□□ -1.37
GABREP78334 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.52□□□□□ -1.37
GABREP78334 MAPK10-323ENST00000641493 3207 ntBASIC6.52□□□□□ -1.37
GABREP78334 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.52□□□□□ -1.37
GABREP78334 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
GABREP78334 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.52□□□□□ -1.37
GABREP78334 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GABREP78334 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GABREP78334 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GABREP78334 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GABREP78334 OR4C1P-202ENST00000641065 1569 ntBASIC6.52□□□□□ -1.37
GABREP78334 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
GABREP78334 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GABREP78334 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.51□□□□□ -1.37
GABREP78334 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
GABREP78334 AC090771.1-201ENST00000585803 1618 ntBASIC6.51□□□□□ -1.37
GABREP78334 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
GABREP78334 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.51□□□□□ -1.37
GABREP78334 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.51□□□□□ -1.37
GABREP78334 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
GABREP78334 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
GABREP78334 RNU6-353P-201ENST00000364266 108 ntBASIC6.51□□□□□ -1.37
GABREP78334 RNA5SP433-201ENST00000364491 114 ntBASIC6.51□□□□□ -1.37
GABREP78334 RNA5SP512-201ENST00000364550 120 ntBASIC6.51□□□□□ -1.37
GABREP78334 RNA5SP172-201ENST00000365061 118 ntBASIC6.51□□□□□ -1.37
GABREP78334 Y_RNA.318-201ENST00000365131 97 ntBASIC6.51□□□□□ -1.37
GABREP78334 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 RNU6-452P-201ENST00000384406 107 ntBASIC6.51□□□□□ -1.37
GABREP78334 RNU6-549P-201ENST00000384433 107 ntBASIC6.51□□□□□ -1.37
GABREP78334 RNU6-83P-201ENST00000384568 112 ntBASIC6.51□□□□□ -1.37
GABREP78334 RNU6-1263P-201ENST00000384601 106 ntBASIC6.51□□□□□ -1.37
GABREP78334 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.51□□□□□ -1.37
GABREP78334 AP000357.1-201ENST00000409926 1165 ntBASIC6.51□□□□□ -1.37
GABREP78334 RAP1BP1-201ENST00000412709 553 ntBASIC6.51□□□□□ -1.37
GABREP78334 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 OR4K6P-201ENST00000416478 897 ntBASIC6.51□□□□□ -1.37
GABREP78334 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.51□□□□□ -1.37
GABREP78334 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.51□□□□□ -1.37
GABREP78334 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.51□□□□□ -1.37
GABREP78334 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.51□□□□□ -1.37
GABREP78334 AC114755.4-201ENST00000439114 443 ntBASIC6.51□□□□□ -1.37
GABREP78334 FGF7P5-201ENST00000441829 291 ntBASIC6.51□□□□□ -1.37
GABREP78334 OR13K1P-201ENST00000444577 975 ntBASIC6.51□□□□□ -1.37
GABREP78334 HMGN1P2-201ENST00000445197 310 ntBASIC6.51□□□□□ -1.37
GABREP78334 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.51□□□□□ -1.37
GABREP78334 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.51□□□□□ -1.37
GABREP78334 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.51□□□□□ -1.37
GABREP78334 NECAP1P2-201ENST00000455668 727 ntBASIC6.51□□□□□ -1.37
GABREP78334 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.51□□□□□ -1.37
GABREP78334 AC131233.1-201ENST00000479200 955 ntBASIC6.51□□□□□ -1.37
GABREP78334 AC126121.1-201ENST00000482313 553 ntBASIC6.51□□□□□ -1.37
GABREP78334 PPP1R11P1-201ENST00000486095 376 ntBASIC6.51□□□□□ -1.37
GABREP78334 SNRPCP6-201ENST00000528310 210 ntBASIC6.51□□□□□ -1.37
GABREP78334 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.51□□□□□ -1.37
GABREP78334 AC006512.2-201ENST00000543250 486 ntBASIC6.51□□□□□ -1.37
GABREP78334 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.51□□□□□ -1.37
GABREP78334 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.51□□□□□ -1.37
GABREP78334 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.51□□□□□ -1.37
GABREP78334 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.51□□□□□ -1.37
GABREP78334 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.51□□□□□ -1.37
GABREP78334 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.51□□□□□ -1.37
GABREP78334 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.51□□□□□ -1.37
GABREP78334 AC121247.2-201ENST00000604776 136 ntBASIC6.51□□□□□ -1.37
GABREP78334 AL583856.2-201ENST00000606298 543 ntBASIC6.51□□□□□ -1.37
GABREP78334 AP003392.5-201ENST00000607857 415 ntBASIC6.51□□□□□ -1.37
GABREP78334 AP000255.1-201ENST00000610276 676 ntBASIC6.51□□□□□ -1.37
GABREP78334 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.51□□□□□ -1.37
GABREP78334 AC109454.4-201ENST00000623411 649 ntBASIC6.51□□□□□ -1.37
GABREP78334 AC022400.9-201ENST00000623633 273 ntBASIC6.51□□□□□ -1.37
GABREP78334 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.51□□□□□ -1.37
GABREP78334 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.51□□□□□ -1.37
GABREP78334 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 AC129502.1-201ENST00000623261 1654 ntBASIC6.51□□□□□ -1.37
GABREP78334 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 PROS2P-201ENST00000474651 1951 ntBASIC6.51□□□□□ -1.37
GABREP78334 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
GABREP78334 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
GABREP78334 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
GABREP78334 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABREP78334 LINC01613-201ENST00000561476 2780 ntBASIC6.51□□□□□ -1.37
GABREP78334 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms