Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
YBX1P67809 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
YBX1P67809 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
YBX1P67809 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC6.55□□□□□ -1.36
YBX1P67809 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
YBX1P67809 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
YBX1P67809 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
YBX1P67809 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.55□□□□□ -1.36
YBX1P67809 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
YBX1P67809 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.55□□□□□ -1.36
YBX1P67809 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 ZNF806-201ENST00000438300 1774 ntBASIC6.54□□□□□ -1.36
YBX1P67809 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
YBX1P67809 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
YBX1P67809 AL359263.1-201ENST00000441188 2796 ntBASIC6.54□□□□□ -1.36
YBX1P67809 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
YBX1P67809 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 RNU6-553P-201ENST00000364047 96 ntBASIC6.54□□□□□ -1.36
YBX1P67809 RN7SKP191-201ENST00000364713 306 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AC092634.1-201ENST00000366505 199 ntBASIC6.54□□□□□ -1.36
YBX1P67809 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
YBX1P67809 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 MIR551B-201ENST00000384984 96 ntBASIC6.54□□□□□ -1.36
YBX1P67809 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
YBX1P67809 ATP5F1P3-201ENST00000397213 657 ntBASIC6.54□□□□□ -1.36
YBX1P67809 ATF1P1-201ENST00000406040 927 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AL590084.1-201ENST00000407885 387 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.54□□□□□ -1.36
YBX1P67809 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.54□□□□□ -1.36
YBX1P67809 AL672212.1-201ENST00000422246 400 ntBASIC6.54□□□□□ -1.36
YBX1P67809 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC6.54□□□□□ -1.36
YBX1P67809 AL160175.1-201ENST00000428124 247 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.54□□□□□ -1.36
YBX1P67809 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.54□□□□□ -1.36
YBX1P67809 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC6.54□□□□□ -1.36
YBX1P67809 AL356121.1-201ENST00000442911 156 ntBASIC6.54□□□□□ -1.36
YBX1P67809 HMGB3P6-201ENST00000444896 598 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.54□□□□□ -1.36
YBX1P67809 RNU7-157P-201ENST00000459600 66 ntBASIC6.54□□□□□ -1.36
YBX1P67809 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.54□□□□□ -1.36
YBX1P67809 RPS26P11-201ENST00000463445 348 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AC023245.1-201ENST00000468501 517 ntBASIC6.54□□□□□ -1.36
YBX1P67809 RN7SL216P-201ENST00000471607 298 ntBASIC6.54□□□□□ -1.36
YBX1P67809 RN7SL790P-201ENST00000474043 298 ntBASIC6.54□□□□□ -1.36
YBX1P67809 RPS26P6-201ENST00000475156 348 ntBASIC6.54□□□□□ -1.36
YBX1P67809 RN7SL836P-201ENST00000476140 296 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AC068724.1-201ENST00000487100 792 ntBASIC6.54□□□□□ -1.36
YBX1P67809 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.54□□□□□ -1.36
YBX1P67809 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC6.54□□□□□ -1.36
YBX1P67809 OR5H4P-201ENST00000510851 923 ntBASIC6.54□□□□□ -1.36
YBX1P67809 NDUFB4P12-201ENST00000513465 390 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AC133963.2-201ENST00000513686 578 ntBASIC6.54□□□□□ -1.36
YBX1P67809 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.54□□□□□ -1.36
YBX1P67809 AC067904.2-201ENST00000517322 1283 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.54□□□□□ -1.36
YBX1P67809 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC6.54□□□□□ -1.36
YBX1P67809 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
YBX1P67809 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.54□□□□□ -1.36
YBX1P67809 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.54□□□□□ -1.36
YBX1P67809 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.54□□□□□ -1.36
YBX1P67809 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.54□□□□□ -1.36
YBX1P67809 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.54□□□□□ -1.36
YBX1P67809 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.54□□□□□ -1.36
YBX1P67809 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.54□□□□□ -1.36
YBX1P67809 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.54□□□□□ -1.36
YBX1P67809 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.54□□□□□ -1.36
YBX1P67809 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.54□□□□□ -1.36
YBX1P67809 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.54□□□□□ -1.36
YBX1P67809 BUB1P1-201ENST00000603541 607 ntBASIC6.54□□□□□ -1.36
YBX1P67809 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.54□□□□□ -1.36
YBX1P67809 AC016877.3-201ENST00000606778 504 ntBASIC6.54□□□□□ -1.36
YBX1P67809 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.54□□□□□ -1.36
YBX1P67809 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
YBX1P67809 OR1N1-202ENST00000619659 939 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AC024595.1-201ENST00000623088 387 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AC007494.3-201ENST00000624660 743 ntBASIC6.54□□□□□ -1.36
YBX1P67809 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.54□□□□□ -1.36
YBX1P67809 AL357140.4-201ENST00000636827 412 ntBASIC6.54□□□□□ -1.36
YBX1P67809 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
YBX1P67809 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
YBX1P67809 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms