Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 AC138517.1-201ENST00000515724 568 ntBASIC3.87□□□□□ -1.79
RPL39P62891 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC3.87□□□□□ -1.79
RPL39P62891 WBP1LP3-201ENST00000523033 208 ntBASIC3.87□□□□□ -1.79
RPL39P62891 CASP5-209ENST00000531367 879 ntTSL 5 BASIC3.87□□□□□ -1.79
RPL39P62891 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC3.87□□□□□ -1.79
RPL39P62891 HSPE1P2-201ENST00000554777 306 ntBASIC3.87□□□□□ -1.79
RPL39P62891 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC3.87□□□□□ -1.79
RPL39P62891 MTCYBP13-201ENST00000578634 1093 ntBASIC3.87□□□□□ -1.79
RPL39P62891 AC005244.1-201ENST00000582566 339 ntBASIC3.87□□□□□ -1.79
RPL39P62891 MIR6809-201ENST00000612189 116 ntBASIC3.87□□□□□ -1.79
RPL39P62891 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC3.87□□□□□ -1.79
RPL39P62891 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC3.87□□□□□ -1.79
RPL39P62891 AL357140.4-201ENST00000636827 412 ntBASIC3.87□□□□□ -1.79
RPL39P62891 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC3.87□□□□□ -1.79
RPL39P62891 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 MT-RNR2-201ENST00000387347 1559 ntBASIC3.87□□□□□ -1.79
RPL39P62891 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC3.87□□□□□ -1.79
RPL39P62891 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
RPL39P62891 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.87□□□□□ -1.79
RPL39P62891 THAP12P5-201ENST00000405864 2275 ntBASIC3.87□□□□□ -1.79
RPL39P62891 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC3.87□□□□□ -1.79
RPL39P62891 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 PDZK1P1-202ENST00000425209 1350 ntBASIC3.87□□□□□ -1.79
RPL39P62891 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC3.87□□□□□ -1.79
RPL39P62891 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC3.87□□□□□ -1.79
RPL39P62891 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 AC007842.1-201ENST00000597336 2039 ntBASIC3.87□□□□□ -1.79
RPL39P62891 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPL39P62891 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC3.86□□□□□ -1.79
RPL39P62891 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC3.86□□□□□ -1.79
RPL39P62891 Z83820.1-201ENST00000456978 1499 ntBASIC3.86□□□□□ -1.79
RPL39P62891 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
RPL39P62891 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC3.86□□□□□ -1.79
RPL39P62891 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RPL39P62891 QRSL1P1-201ENST00000400977 1540 ntBASIC3.86□□□□□ -1.79
RPL39P62891 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.86□□□□□ -1.79
RPL39P62891 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 MIR130B-202ENST00000385018 82 ntBASIC3.86□□□□□ -1.79
RPL39P62891 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RPL39P62891 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RPL39P62891 AL133260.1-201ENST00000405720 405 ntBASIC3.86□□□□□ -1.79
RPL39P62891 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC3.86□□□□□ -1.79
RPL39P62891 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RPL39P62891 AC099782.1-201ENST00000425889 474 ntBASIC3.86□□□□□ -1.79
RPL39P62891 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RPL39P62891 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC3.86□□□□□ -1.79
RPL39P62891 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 RN7SL583P-201ENST00000475692 287 ntBASIC3.86□□□□□ -1.79
RPL39P62891 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 SETP21-201ENST00000514799 892 ntBASIC3.86□□□□□ -1.79
RPL39P62891 RN7SKP238-201ENST00000516483 249 ntBASIC3.86□□□□□ -1.79
RPL39P62891 SCARNA20.4-201ENST00000516969 131 ntBASIC3.86□□□□□ -1.79
RPL39P62891 SCARNA6.1-201ENST00000516989 238 ntBASIC3.86□□□□□ -1.79
RPL39P62891 AC021678.3-201ENST00000517893 476 ntBASIC3.86□□□□□ -1.79
RPL39P62891 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC3.86□□□□□ -1.79
RPL39P62891 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC3.86□□□□□ -1.79
RPL39P62891 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC3.86□□□□□ -1.79
RPL39P62891 AC092332.1-201ENST00000563684 829 ntBASIC3.86□□□□□ -1.79
RPL39P62891 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC3.86□□□□□ -1.79
RPL39P62891 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC3.86□□□□□ -1.79
RPL39P62891 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC3.86□□□□□ -1.79
RPL39P62891 H3F3BP2-201ENST00000583907 357 ntBASIC3.86□□□□□ -1.79
RPL39P62891 AC010487.1-201ENST00000594408 1172 ntBASIC3.86□□□□□ -1.79
RPL39P62891 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RPL39P62891 WBP1LP12-201ENST00000604449 331 ntBASIC3.86□□□□□ -1.79
RPL39P62891 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC3.86□□□□□ -1.79
RPL39P62891 AL138820.1-201ENST00000617901 5305 ntBASIC3.86□□□□□ -1.79
RPL39P62891 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RPL39P62891 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RPL39P62891 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC3.86□□□□□ -1.79
RPL39P62891 AL354854.1-201ENST00000455940 1363 ntBASIC3.86□□□□□ -1.79
RPL39P62891 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC3.86□□□□□ -1.79
RPL39P62891 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RPL39P62891 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RPL39P62891 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RPL39P62891 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.86□□□□□ -1.79
RPL39P62891 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
RPL39P62891 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.85□□□□□ -1.79
RPL39P62891 AC093591.2-201ENST00000565254 3843 ntBASIC3.85□□□□□ -1.79
RPL39P62891 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
RPL39P62891 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPL39P62891 AC114947.2-201ENST00000565748 2125 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms