Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL596275.2-208ENST00000641192 594 ntBASIC4.78□□□□□ -1.64
LMO4P61968 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMO4P61968 AC010329.1-201ENST00000593903 8328 ntBASIC4.78□□□□□ -1.64
LMO4P61968 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMO4P61968 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC4.78□□□□□ -1.64
LMO4P61968 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.78□□□□□ -1.64
LMO4P61968 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.78□□□□□ -1.64
LMO4P61968 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LMO4P61968 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LMO4P61968 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
LMO4P61968 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LMO4P61968 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC4.77□□□□□ -1.65
LMO4P61968 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 IMMTP1-201ENST00000435590 2219 ntBASIC4.77□□□□□ -1.65
LMO4P61968 MFSD8-219ENST00000641228 2559 ntBASIC4.77□□□□□ -1.65
LMO4P61968 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LMO4P61968 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 RN7SKP162-201ENST00000363605 345 ntBASIC4.77□□□□□ -1.65
LMO4P61968 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO4P61968 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.77□□□□□ -1.65
LMO4P61968 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
LMO4P61968 RMRPP5-201ENST00000411156 267 ntBASIC4.77□□□□□ -1.65
LMO4P61968 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 BX119904.3-201ENST00000428194 957 ntBASIC4.77□□□□□ -1.65
LMO4P61968 AL450996.1-201ENST00000445574 1202 ntBASIC4.77□□□□□ -1.65
LMO4P61968 AC073072.2-201ENST00000447425 348 ntBASIC4.77□□□□□ -1.65
LMO4P61968 AL500527.1-201ENST00000448532 255 ntBASIC4.77□□□□□ -1.65
LMO4P61968 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO4P61968 EIF2S2P5-201ENST00000457635 968 ntBASIC4.77□□□□□ -1.65
LMO4P61968 AC087672.1-201ENST00000479876 766 ntBASIC4.77□□□□□ -1.65
LMO4P61968 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO4P61968 DEFB109A-201ENST00000482450 265 ntBASIC4.77□□□□□ -1.65
LMO4P61968 AC108693.1-201ENST00000496068 432 ntBASIC4.77□□□□□ -1.65
LMO4P61968 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO4P61968 AC074255.1-201ENST00000511259 501 ntBASIC4.77□□□□□ -1.65
LMO4P61968 IGKV2-19-201ENST00000518132 283 ntBASIC4.77□□□□□ -1.65
LMO4P61968 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO4P61968 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.77□□□□□ -1.65
LMO4P61968 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 AC027667.1-201ENST00000545814 304 ntBASIC4.77□□□□□ -1.65
LMO4P61968 AC009712.1-201ENST00000564938 316 ntBASIC4.77□□□□□ -1.65
LMO4P61968 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO4P61968 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO4P61968 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.77□□□□□ -1.65
LMO4P61968 AC079395.2-201ENST00000610982 737 ntBASIC4.77□□□□□ -1.65
LMO4P61968 AL356752.1-201ENST00000615844 593 ntBASIC4.77□□□□□ -1.65
LMO4P61968 AC003001.2-201ENST00000616294 831 ntBASIC4.77□□□□□ -1.65
LMO4P61968 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LMO4P61968 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC4.77□□□□□ -1.65
LMO4P61968 AL390318.1-201ENST00000624564 687 ntBASIC4.77□□□□□ -1.65
LMO4P61968 AC018659.2-201ENST00000624690 715 ntBASIC4.77□□□□□ -1.65
LMO4P61968 AC091948.2-201ENST00000636510 279 ntBASIC4.77□□□□□ -1.65
LMO4P61968 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 AC114786.1-201ENST00000512892 1415 ntBASIC4.77□□□□□ -1.65
LMO4P61968 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC4.77□□□□□ -1.65
LMO4P61968 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO4P61968 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LMO4P61968 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.77□□□□□ -1.65
LMO4P61968 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 AC114876.1-201ENST00000490962 1366 ntBASIC4.77□□□□□ -1.65
LMO4P61968 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LMO4P61968 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LMO4P61968 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC4.76□□□□□ -1.65
LMO4P61968 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LMO4P61968 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 Z83820.1-201ENST00000456978 1499 ntBASIC4.76□□□□□ -1.65
LMO4P61968 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.76□□□□□ -1.65
LMO4P61968 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LMO4P61968 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.76□□□□□ -1.65
LMO4P61968 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 RNA5SP131-201ENST00000365452 119 ntBASIC4.76□□□□□ -1.65
LMO4P61968 AC083799.1-201ENST00000366451 910 ntBASIC4.76□□□□□ -1.65
LMO4P61968 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LMO4P61968 SNORA70H-201ENST00000383910 135 ntBASIC4.76□□□□□ -1.65
LMO4P61968 SNORA70J-201ENST00000384182 135 ntBASIC4.76□□□□□ -1.65
LMO4P61968 MIR1178-201ENST00000408396 91 ntBASIC4.76□□□□□ -1.65
LMO4P61968 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.76□□□□□ -1.65
LMO4P61968 BMS1P13-201ENST00000417301 885 ntBASIC4.76□□□□□ -1.65
LMO4P61968 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.76□□□□□ -1.65
LMO4P61968 NIFKP3-201ENST00000417799 865 ntBASIC4.76□□□□□ -1.65
LMO4P61968 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.76□□□□□ -1.65
LMO4P61968 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.76□□□□□ -1.65
LMO4P61968 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.76□□□□□ -1.65
LMO4P61968 AC012075.1-201ENST00000436549 580 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms