Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SNORA43.3-201ENST00000517240 103 ntBASIC5.74□□□□□ -1.49
AP1S1P61966 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.74□□□□□ -1.49
AP1S1P61966 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.74□□□□□ -1.49
AP1S1P61966 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.74□□□□□ -1.49
AP1S1P61966 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.74□□□□□ -1.49
AP1S1P61966 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.74□□□□□ -1.49
AP1S1P61966 HNRNPCP1-201ENST00000556181 766 ntBASIC5.74□□□□□ -1.49
AP1S1P61966 AC135626.1-201ENST00000556983 435 ntBASIC5.74□□□□□ -1.49
AP1S1P61966 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.74□□□□□ -1.49
AP1S1P61966 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.74□□□□□ -1.49
AP1S1P61966 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.74□□□□□ -1.49
AP1S1P61966 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.74□□□□□ -1.49
AP1S1P61966 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.74□□□□□ -1.49
AP1S1P61966 AC103703.1-201ENST00000634783 663 ntBASIC5.74□□□□□ -1.49
AP1S1P61966 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
AP1S1P61966 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP1S1P61966 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.74□□□□□ -1.49
AP1S1P61966 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
AP1S1P61966 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.74□□□□□ -1.49
AP1S1P61966 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP1S1P61966 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
AP1S1P61966 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.74□□□□□ -1.49
AP1S1P61966 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
AP1S1P61966 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AP1S1P61966 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP1S1P61966 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP1S1P61966 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP1S1P61966 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
AP1S1P61966 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
AP1S1P61966 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP1S1P61966 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP1S1P61966 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP1S1P61966 TMSB4XP4-201ENST00000323496 618 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 SNORA17A-201ENST00000391185 133 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
AP1S1P61966 SNORA11.3-201ENST00000408471 128 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 RNA5SP178-201ENST00000410380 128 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 RN7SKP286-201ENST00000410894 299 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 AL662874.1-201ENST00000426065 230 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 AL590399.2-201ENST00000427536 309 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 AC242426.1-201ENST00000435270 960 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 AC002504.1-201ENST00000438281 691 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.73□□□□□ -1.49
AP1S1P61966 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.73□□□□□ -1.49
AP1S1P61966 RPL36AP39-201ENST00000445859 318 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AP1S1P61966 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.73□□□□□ -1.49
AP1S1P61966 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.73□□□□□ -1.49
AP1S1P61966 TMEM97P2-201ENST00000517841 403 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 AC112191.2-201ENST00000522428 333 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.73□□□□□ -1.49
AP1S1P61966 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.73□□□□□ -1.49
AP1S1P61966 HSPE1P2-201ENST00000554777 306 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.73□□□□□ -1.49
AP1S1P61966 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.73□□□□□ -1.49
AP1S1P61966 MIR4311-201ENST00000580794 100 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 SNORA11.6-201ENST00000619030 128 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 AC026124.2-201ENST00000621847 656 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 SNORA17.5-201ENST00000630429 132 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP1S1P61966 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP1S1P61966 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
AP1S1P61966 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.73□□□□□ -1.49
AP1S1P61966 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.73□□□□□ -1.49
AP1S1P61966 AC093671.1-201ENST00000624981 2929 ntBASIC5.73□□□□□ -1.49
AP1S1P61966 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP1S1P61966 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AP1S1P61966 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
AP1S1P61966 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AP1S1P61966 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP1S1P61966 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP1S1P61966 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.73□□□□□ -1.49
AP1S1P61966 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
AP1S1P61966 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.72□□□□□ -1.49
AP1S1P61966 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP1S1P61966 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP1S1P61966 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP1S1P61966 MRE11P1-201ENST00000464884 2127 ntBASIC5.72□□□□□ -1.49
AP1S1P61966 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.72□□□□□ -1.49
AP1S1P61966 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP1S1P61966 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.72□□□□□ -1.49
AP1S1P61966 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AP1S1P61966 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.72□□□□□ -1.49
AP1S1P61966 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AP1S1P61966 AC006600.2-201ENST00000624834 2506 ntBASIC5.72□□□□□ -1.49
AP1S1P61966 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
AP1S1P61966 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
AP1S1P61966 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
AP1S1P61966 RNA5SP131-201ENST00000365452 119 ntBASIC5.72□□□□□ -1.49
AP1S1P61966 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.72□□□□□ -1.49
AP1S1P61966 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
AP1S1P61966 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.72□□□□□ -1.49
AP1S1P61966 RNA5SP122-201ENST00000384457 108 ntBASIC5.72□□□□□ -1.49
AP1S1P61966 RNU11-201ENST00000387069 134 ntBASIC5.72□□□□□ -1.49
AP1S1P61966 GAPDHP42-201ENST00000406848 981 ntBASIC5.72□□□□□ -1.49
AP1S1P61966 RPS6P23-201ENST00000413224 722 ntBASIC5.72□□□□□ -1.49
AP1S1P61966 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.72□□□□□ -1.49
AP1S1P61966 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.72□□□□□ -1.49
AP1S1P61966 AL450996.1-201ENST00000445574 1202 ntBASIC5.72□□□□□ -1.49
AP1S1P61966 AC016724.1-201ENST00000453215 421 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms