Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VBP1P61758 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VBP1P61758 HSPD1P9-201ENST00000420325 1636 ntBASIC5.05□□□□□ -1.6
VBP1P61758 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VBP1P61758 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VBP1P61758 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC5.04□□□□□ -1.6
VBP1P61758 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.04□□□□□ -1.6
VBP1P61758 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.04□□□□□ -1.6
VBP1P61758 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
VBP1P61758 OR55B1P-203ENST00000641518 2602 ntBASIC5.04□□□□□ -1.6
VBP1P61758 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VBP1P61758 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VBP1P61758 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VBP1P61758 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VBP1P61758 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VBP1P61758 RNU1-5P-201ENST00000362684 144 ntBASIC5.04□□□□□ -1.6
VBP1P61758 SNORA55-201ENST00000364587 135 ntBASIC5.04□□□□□ -1.6
VBP1P61758 RN7SKP28-201ENST00000364770 305 ntBASIC5.04□□□□□ -1.6
VBP1P61758 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
VBP1P61758 AL672167.2-201ENST00000377164 879 ntBASIC5.04□□□□□ -1.6
VBP1P61758 SNORA7A-201ENST00000384765 139 ntBASIC5.04□□□□□ -1.6
VBP1P61758 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VBP1P61758 AC007068.1-201ENST00000396690 844 ntBASIC5.04□□□□□ -1.6
VBP1P61758 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC5.04□□□□□ -1.6
VBP1P61758 MICG-208ENST00000416822 132 ntBASIC5.04□□□□□ -1.6
VBP1P61758 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VBP1P61758 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
VBP1P61758 PRPF38AP1-201ENST00000451976 933 ntBASIC5.04□□□□□ -1.6
VBP1P61758 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.04□□□□□ -1.6
VBP1P61758 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.04□□□□□ -1.6
VBP1P61758 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.04□□□□□ -1.6
VBP1P61758 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.04□□□□□ -1.6
VBP1P61758 AC110056.1-201ENST00000525759 911 ntBASIC5.04□□□□□ -1.6
VBP1P61758 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.04□□□□□ -1.6
VBP1P61758 AC090022.1-201ENST00000546569 311 ntBASIC5.04□□□□□ -1.6
VBP1P61758 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.04□□□□□ -1.6
VBP1P61758 AC127381.1-201ENST00000555979 939 ntBASIC5.04□□□□□ -1.6
VBP1P61758 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.04□□□□□ -1.6
VBP1P61758 AC005632.2-201ENST00000564271 828 ntBASIC5.04□□□□□ -1.6
VBP1P61758 MIR4675-201ENST00000577898 77 ntBASIC5.04□□□□□ -1.6
VBP1P61758 MIR3936-201ENST00000584304 110 ntBASIC5.04□□□□□ -1.6
VBP1P61758 OR7E19P-202ENST00000589942 844 ntBASIC5.04□□□□□ -1.6
VBP1P61758 AC024085.1-201ENST00000604299 432 ntBASIC5.04□□□□□ -1.6
VBP1P61758 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.04□□□□□ -1.6
VBP1P61758 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.04□□□□□ -1.6
VBP1P61758 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC5.04□□□□□ -1.6
VBP1P61758 AC073488.3-201ENST00000631611 778 ntBASIC5.04□□□□□ -1.6
VBP1P61758 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.04□□□□□ -1.6
VBP1P61758 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.04□□□□□ -1.6
VBP1P61758 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.04□□□□□ -1.6
VBP1P61758 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VBP1P61758 AC104623.2-202ENST00000623477 4002 ntBASIC5.04□□□□□ -1.6
VBP1P61758 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
VBP1P61758 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
VBP1P61758 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
VBP1P61758 CASC19-246ENST00000641625 1606 ntBASIC5.04□□□□□ -1.6
VBP1P61758 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VBP1P61758 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.04□□□□□ -1.6
VBP1P61758 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
VBP1P61758 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
VBP1P61758 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VBP1P61758 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
VBP1P61758 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VBP1P61758 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VBP1P61758 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VBP1P61758 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VBP1P61758 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VBP1P61758 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VBP1P61758 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.03□□□□□ -1.6
VBP1P61758 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VBP1P61758 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.03□□□□□ -1.6
VBP1P61758 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VBP1P61758 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VBP1P61758 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VBP1P61758 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VBP1P61758 AL138847.1-201ENST00000258651 546 ntBASIC5.03□□□□□ -1.6
VBP1P61758 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.03□□□□□ -1.6
VBP1P61758 COX5BP7-201ENST00000414780 274 ntBASIC5.03□□□□□ -1.6
VBP1P61758 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.03□□□□□ -1.6
VBP1P61758 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.03□□□□□ -1.6
VBP1P61758 AC013470.3-201ENST00000420252 1194 ntBASIC5.03□□□□□ -1.6
VBP1P61758 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.03□□□□□ -1.6
VBP1P61758 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.03□□□□□ -1.6
VBP1P61758 AL645939.3-201ENST00000435408 225 ntBASIC5.03□□□□□ -1.6
VBP1P61758 OR2L9P-201ENST00000444456 913 ntBASIC5.03□□□□□ -1.6
VBP1P61758 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.03□□□□□ -1.6
VBP1P61758 AF305872.1-201ENST00000485217 471 ntBASIC5.03□□□□□ -1.6
VBP1P61758 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.03□□□□□ -1.6
VBP1P61758 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
VBP1P61758 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.03□□□□□ -1.6
VBP1P61758 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.03□□□□□ -1.6
VBP1P61758 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.03□□□□□ -1.6
VBP1P61758 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
VBP1P61758 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.03□□□□□ -1.6
VBP1P61758 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.03□□□□□ -1.6
VBP1P61758 AC040958.1-201ENST00000561102 201 ntBASIC5.03□□□□□ -1.6
VBP1P61758 MTCYBP13-201ENST00000578634 1093 ntBASIC5.03□□□□□ -1.6
VBP1P61758 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.03□□□□□ -1.6
VBP1P61758 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VBP1P61758 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms