Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.28□□□□□ -1.4
GFRA1P56159 AC125494.2-201ENST00000602431 657 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.28□□□□□ -1.4
GFRA1P56159 WBP1LP12-201ENST00000604449 331 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AC007204.2-201ENST00000615022 616 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AP005212.3-201ENST00000619964 528 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AL607023.1-201ENST00000620045 248 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.28□□□□□ -1.4
GFRA1P56159 AC090582.1-201ENST00000636321 199 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 CCT8P1-201ENST00000413611 1657 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.28□□□□□ -1.4
GFRA1P56159 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.28□□□□□ -1.4
GFRA1P56159 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.28□□□□□ -1.4
GFRA1P56159 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 AC116158.1-201ENST00000560231 2129 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.28□□□□□ -1.4
GFRA1P56159 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.27□□□□□ -1.4
GFRA1P56159 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.27□□□□□ -1.4
GFRA1P56159 MTND5P29-201ENST00000458676 1807 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
GFRA1P56159 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.27□□□□□ -1.41
GFRA1P56159 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.27□□□□□ -1.41
GFRA1P56159 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.27□□□□□ -1.41
GFRA1P56159 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 AC009220.2-201ENST00000489759 1751 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.27□□□□□ -1.41
GFRA1P56159 AL391994.1-201ENST00000254724 282 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
GFRA1P56159 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 RN7SKP59-201ENST00000410520 314 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 RNU6-77P-201ENST00000410554 91 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 RN7SKP91-201ENST00000410852 288 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.27□□□□□ -1.41
GFRA1P56159 MRPS36P1-201ENST00000421291 307 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AL022400.1-201ENST00000423946 935 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.27□□□□□ -1.41
GFRA1P56159 E2F6P1-201ENST00000428850 745 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.27□□□□□ -1.41
GFRA1P56159 RPS26P30-201ENST00000443431 335 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.27□□□□□ -1.41
GFRA1P56159 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 RPL31P44-201ENST00000447680 377 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 GAPDHP39-201ENST00000481866 979 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AC073522.1-201ENST00000483312 377 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AC068724.1-201ENST00000487100 792 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.27□□□□□ -1.41
GFRA1P56159 RPS6P4-201ENST00000494693 758 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 MTATP6P22-201ENST00000507369 598 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AC079395.1-201ENST00000510981 262 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 RNU2-30P-201ENST00000516209 141 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 Y_RNA.695-201ENST00000516715 107 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
GFRA1P56159 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
GFRA1P56159 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.27□□□□□ -1.41
GFRA1P56159 AC007537.1-201ENST00000539347 327 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.27□□□□□ -1.41
GFRA1P56159 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.27□□□□□ -1.41
GFRA1P56159 AGGF1P4-201ENST00000568249 801 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.27□□□□□ -1.41
GFRA1P56159 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.27□□□□□ -1.41
GFRA1P56159 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 AC004987.4-201ENST00000603383 338 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AC007255.2-201ENST00000604053 631 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 AL592221.1-201ENST00000605266 382 ntBASIC6.27□□□□□ -1.41
GFRA1P56159 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.27□□□□□ -1.41
GFRA1P56159 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.27□□□□□ -1.41
GFRA1P56159 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.27□□□□□ -1.41
GFRA1P56159 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.27□□□□□ -1.41
GFRA1P56159 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
GFRA1P56159 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.27□□□□□ -1.41
GFRA1P56159 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.27□□□□□ -1.41
GFRA1P56159 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
GFRA1P56159 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms