Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.83□□□□□ -1.32
NUP98P52948 RNU1-146P-201ENST00000364015 165 ntBASIC6.83□□□□□ -1.32
NUP98P52948 AC096921.1-201ENST00000411661 375 ntBASIC6.83□□□□□ -1.32
NUP98P52948 RPS26P38-201ENST00000414476 348 ntBASIC6.83□□□□□ -1.32
NUP98P52948 EI24P4-201ENST00000423683 1078 ntBASIC6.83□□□□□ -1.32
NUP98P52948 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.83□□□□□ -1.32
NUP98P52948 PA2G4P6-201ENST00000438325 1197 ntBASIC6.83□□□□□ -1.32
NUP98P52948 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.83□□□□□ -1.32
NUP98P52948 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.83□□□□□ -1.32
NUP98P52948 RPS23P1-201ENST00000491662 432 ntBASIC6.83□□□□□ -1.32
NUP98P52948 RPL37AP8-201ENST00000494116 276 ntBASIC6.83□□□□□ -1.32
NUP98P52948 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 AC114947.2-201ENST00000565748 2125 ntBASIC6.83□□□□□ -1.32
NUP98P52948 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.83□□□□□ -1.32
NUP98P52948 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
NUP98P52948 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.83□□□□□ -1.32
NUP98P52948 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
NUP98P52948 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.83□□□□□ -1.32
NUP98P52948 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.83□□□□□ -1.32
NUP98P52948 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.83□□□□□ -1.32
NUP98P52948 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
NUP98P52948 RPL23AP17-201ENST00000401064 499 ntBASIC6.83□□□□□ -1.32
NUP98P52948 RNA5SP487-201ENST00000410186 122 ntBASIC6.83□□□□□ -1.32
NUP98P52948 RNGTTP1-201ENST00000420965 728 ntBASIC6.83□□□□□ -1.32
NUP98P52948 AL590762.4-201ENST00000425885 253 ntBASIC6.83□□□□□ -1.32
NUP98P52948 AC092647.2-201ENST00000452998 253 ntBASIC6.83□□□□□ -1.32
NUP98P52948 RPS18P6-201ENST00000476880 458 ntBASIC6.83□□□□□ -1.32
NUP98P52948 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 ST13P12-201ENST00000508958 1094 ntBASIC6.83□□□□□ -1.32
NUP98P52948 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.83□□□□□ -1.32
NUP98P52948 AP001922.4-201ENST00000526967 290 ntBASIC6.83□□□□□ -1.32
NUP98P52948 OR5AZ1P-201ENST00000527448 943 ntBASIC6.83□□□□□ -1.32
NUP98P52948 EIF4A2P5-201ENST00000529914 499 ntBASIC6.83□□□□□ -1.32
NUP98P52948 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.83□□□□□ -1.32
NUP98P52948 OR1F2P-201ENST00000570470 933 ntBASIC6.83□□□□□ -1.32
NUP98P52948 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.83□□□□□ -1.32
NUP98P52948 AC006116.3-201ENST00000592968 361 ntBASIC6.83□□□□□ -1.32
NUP98P52948 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.83□□□□□ -1.32
NUP98P52948 AC095055.1-201ENST00000603472 1113 ntBASIC6.83□□□□□ -1.32
NUP98P52948 WBP1LP8-201ENST00000617401 327 ntBASIC6.83□□□□□ -1.32
NUP98P52948 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUP98P52948 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
NUP98P52948 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
NUP98P52948 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.82□□□□□ -1.32
NUP98P52948 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NUP98P52948 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
NUP98P52948 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.82□□□□□ -1.32
NUP98P52948 PANDAR-201ENST00000629595 1506 ntBASIC6.82□□□□□ -1.32
NUP98P52948 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.82□□□□□ -1.32
NUP98P52948 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NUP98P52948 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.82□□□□□ -1.32
NUP98P52948 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NUP98P52948 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.82□□□□□ -1.32
NUP98P52948 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NUP98P52948 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NUP98P52948 AC011493.1-201ENST00000596753 1632 ntBASIC6.82□□□□□ -1.32
NUP98P52948 RNA5SP87-201ENST00000384155 118 ntBASIC6.82□□□□□ -1.32
NUP98P52948 U3.28-201ENST00000391249 210 ntBASIC6.82□□□□□ -1.32
NUP98P52948 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.82□□□□□ -1.32
NUP98P52948 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.82□□□□□ -1.32
NUP98P52948 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.82□□□□□ -1.32
NUP98P52948 CEACAMP7-201ENST00000444105 496 ntBASIC6.82□□□□□ -1.32
NUP98P52948 AL451063.1-201ENST00000450164 1133 ntBASIC6.82□□□□□ -1.32
NUP98P52948 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.82□□□□□ -1.32
NUP98P52948 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.82□□□□□ -1.32
NUP98P52948 RN7SL356P-201ENST00000582228 248 ntBASIC6.82□□□□□ -1.32
NUP98P52948 AL513327.3-201ENST00000602618 469 ntBASIC6.82□□□□□ -1.32
NUP98P52948 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.82□□□□□ -1.32
NUP98P52948 AL049539.1-201ENST00000611964 459 ntBASIC6.82□□□□□ -1.32
NUP98P52948 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NUP98P52948 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NUP98P52948 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NUP98P52948 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NUP98P52948 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC6.82□□□□□ -1.32
NUP98P52948 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.82□□□□□ -1.32
NUP98P52948 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
NUP98P52948 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.82□□□□□ -1.32
NUP98P52948 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
NUP98P52948 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NUP98P52948 AC007114.2-201ENST00000576014 4281 ntBASIC6.81□□□□□ -1.32
NUP98P52948 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NUP98P52948 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NUP98P52948 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NUP98P52948 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
NUP98P52948 RNU4-4P-201ENST00000364588 130 ntBASIC6.81□□□□□ -1.32
NUP98P52948 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NUP98P52948 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.81□□□□□ -1.32
NUP98P52948 AC211486.3-201ENST00000412694 621 ntBASIC6.81□□□□□ -1.32
NUP98P52948 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NUP98P52948 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.81□□□□□ -1.32
NUP98P52948 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.81□□□□□ -1.32
NUP98P52948 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms