Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
NEK3P51956 RN7SL475P-201ENST00000583379 298 ntBASIC6.41□□□□□ -1.38
NEK3P51956 MIR4420-201ENST00000583944 77 ntBASIC6.41□□□□□ -1.38
NEK3P51956 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.41□□□□□ -1.38
NEK3P51956 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.41□□□□□ -1.38
NEK3P51956 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.41□□□□□ -1.38
NEK3P51956 AC144521.1-201ENST00000607148 956 ntBASIC6.41□□□□□ -1.38
NEK3P51956 AL451049.1-201ENST00000608672 497 ntBASIC6.41□□□□□ -1.38
NEK3P51956 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.41□□□□□ -1.38
NEK3P51956 AL357140.4-201ENST00000636827 412 ntBASIC6.41□□□□□ -1.38
NEK3P51956 AC073869.7-201ENST00000640874 297 ntBASIC6.41□□□□□ -1.38
NEK3P51956 OR7E91P-202ENST00000642062 1198 ntBASIC6.41□□□□□ -1.38
NEK3P51956 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
NEK3P51956 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.41□□□□□ -1.38
NEK3P51956 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEK3P51956 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.41□□□□□ -1.38
NEK3P51956 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
NEK3P51956 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.41□□□□□ -1.38
NEK3P51956 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.41□□□□□ -1.38
NEK3P51956 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NEK3P51956 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEK3P51956 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
NEK3P51956 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
NEK3P51956 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NEK3P51956 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
NEK3P51956 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.4□□□□□ -1.38
NEK3P51956 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NEK3P51956 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.4□□□□□ -1.38
NEK3P51956 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NEK3P51956 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NEK3P51956 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NEK3P51956 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
NEK3P51956 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NEK3P51956 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
NEK3P51956 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NEK3P51956 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NEK3P51956 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NEK3P51956 AL157702.1-201ENST00000398764 426 ntBASIC6.4□□□□□ -1.38
NEK3P51956 AL136131.1-201ENST00000406079 803 ntBASIC6.4□□□□□ -1.38
NEK3P51956 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.4□□□□□ -1.38
NEK3P51956 AL035422.1-201ENST00000414193 397 ntBASIC6.4□□□□□ -1.38
NEK3P51956 UBE2V1P14-201ENST00000415815 558 ntBASIC6.4□□□□□ -1.38
NEK3P51956 AC092570.3-201ENST00000420113 693 ntBASIC6.4□□□□□ -1.38
NEK3P51956 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.4□□□□□ -1.38
NEK3P51956 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.4□□□□□ -1.38
NEK3P51956 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NEK3P51956 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.4□□□□□ -1.38
NEK3P51956 AL512637.2-201ENST00000431287 1256 ntBASIC6.4□□□□□ -1.38
NEK3P51956 AC112492.2-201ENST00000432774 1030 ntBASIC6.4□□□□□ -1.38
NEK3P51956 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.4□□□□□ -1.38
NEK3P51956 AC094019.1-201ENST00000434678 472 ntBASIC6.4□□□□□ -1.38
NEK3P51956 AL138899.2-201ENST00000439139 499 ntBASIC6.4□□□□□ -1.38
NEK3P51956 OR13K1P-201ENST00000444577 975 ntBASIC6.4□□□□□ -1.38
NEK3P51956 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NEK3P51956 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.4□□□□□ -1.38
NEK3P51956 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.4□□□□□ -1.38
NEK3P51956 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
NEK3P51956 AP002453.1-201ENST00000492327 668 ntBASIC6.4□□□□□ -1.38
NEK3P51956 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.4□□□□□ -1.38
NEK3P51956 KHDC1P1-201ENST00000511053 508 ntBASIC6.4□□□□□ -1.38
NEK3P51956 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.4□□□□□ -1.38
NEK3P51956 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.4□□□□□ -1.38
NEK3P51956 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.4□□□□□ -1.38
NEK3P51956 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.4□□□□□ -1.38
NEK3P51956 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.4□□□□□ -1.38
NEK3P51956 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.4□□□□□ -1.38
NEK3P51956 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.4□□□□□ -1.38
NEK3P51956 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.4□□□□□ -1.38
NEK3P51956 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.4□□□□□ -1.38
NEK3P51956 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.4□□□□□ -1.38
NEK3P51956 AC002310.3-201ENST00000569728 723 ntBASIC6.4□□□□□ -1.38
NEK3P51956 MIR3189-201ENST00000578735 73 ntBASIC6.4□□□□□ -1.38
NEK3P51956 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.4□□□□□ -1.38
NEK3P51956 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
NEK3P51956 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.4□□□□□ -1.38
NEK3P51956 AL356274.1-201ENST00000617064 410 ntBASIC6.4□□□□□ -1.38
NEK3P51956 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.4□□□□□ -1.38
NEK3P51956 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.4□□□□□ -1.38
NEK3P51956 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NEK3P51956 AL136520.1-201ENST00000600311 1322 ntBASIC6.4□□□□□ -1.39
NEK3P51956 AC087516.1-201ENST00000561236 2428 ntBASIC6.4□□□□□ -1.39
NEK3P51956 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NEK3P51956 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NEK3P51956 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.4□□□□□ -1.39
NEK3P51956 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NEK3P51956 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
NEK3P51956 BRAFP1-201ENST00000445336 2703 ntBASIC6.4□□□□□ -1.39
NEK3P51956 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.39□□□□□ -1.39
NEK3P51956 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.39□□□□□ -1.39
NEK3P51956 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
NEK3P51956 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.39□□□□□ -1.39
NEK3P51956 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms