Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.2□□□□□ -1.42
SSR1P43307 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.2□□□□□ -1.42
SSR1P43307 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.2□□□□□ -1.42
SSR1P43307 AC013410.1-201ENST00000436223 1232 ntBASIC6.2□□□□□ -1.42
SSR1P43307 RPS7P3-201ENST00000443360 580 ntBASIC6.2□□□□□ -1.42
SSR1P43307 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.2□□□□□ -1.42
SSR1P43307 RPL38P3-201ENST00000484463 213 ntBASIC6.2□□□□□ -1.42
SSR1P43307 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.2□□□□□ -1.42
SSR1P43307 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.2□□□□□ -1.42
SSR1P43307 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.2□□□□□ -1.42
SSR1P43307 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.2□□□□□ -1.42
SSR1P43307 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.2□□□□□ -1.42
SSR1P43307 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.2□□□□□ -1.42
SSR1P43307 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.2□□□□□ -1.42
SSR1P43307 AP002373.2-201ENST00000541631 1060 ntBASIC6.2□□□□□ -1.42
SSR1P43307 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.2□□□□□ -1.42
SSR1P43307 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.2□□□□□ -1.42
SSR1P43307 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSR1P43307 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.2□□□□□ -1.42
SSR1P43307 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.2□□□□□ -1.42
SSR1P43307 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSR1P43307 AL445670.1-201ENST00000618889 801 ntBASIC6.2□□□□□ -1.42
SSR1P43307 AC096708.4-201ENST00000620563 552 ntBASIC6.2□□□□□ -1.42
SSR1P43307 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.2□□□□□ -1.42
SSR1P43307 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSR1P43307 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
SSR1P43307 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.2□□□□□ -1.42
SSR1P43307 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSR1P43307 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.2□□□□□ -1.42
SSR1P43307 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSR1P43307 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSR1P43307 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.2□□□□□ -1.42
SSR1P43307 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SSR1P43307 CASC19-221ENST00000641309 1382 ntBASIC6.19□□□□□ -1.42
SSR1P43307 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.19□□□□□ -1.42
SSR1P43307 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SSR1P43307 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 RN7SKP128-201ENST00000364270 303 ntBASIC6.19□□□□□ -1.42
SSR1P43307 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 RPSAP40-201ENST00000442343 891 ntBASIC6.19□□□□□ -1.42
SSR1P43307 AC023141.8-201ENST00000442554 208 ntBASIC6.19□□□□□ -1.42
SSR1P43307 EEF1B2P3-201ENST00000447718 678 ntBASIC6.19□□□□□ -1.42
SSR1P43307 AL445466.1-201ENST00000448432 357 ntBASIC6.19□□□□□ -1.42
SSR1P43307 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 AC069304.1-201ENST00000491593 704 ntBASIC6.19□□□□□ -1.42
SSR1P43307 RN7SL568P-201ENST00000493069 298 ntBASIC6.19□□□□□ -1.42
SSR1P43307 AL158068.1-201ENST00000506116 616 ntBASIC6.19□□□□□ -1.42
SSR1P43307 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.19□□□□□ -1.42
SSR1P43307 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.19□□□□□ -1.42
SSR1P43307 OR7E158P-201ENST00000524483 910 ntBASIC6.19□□□□□ -1.42
SSR1P43307 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.19□□□□□ -1.42
SSR1P43307 OR4A42P-201ENST00000531397 938 ntBASIC6.19□□□□□ -1.42
SSR1P43307 AC008126.1-201ENST00000549019 480 ntBASIC6.19□□□□□ -1.42
SSR1P43307 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.19□□□□□ -1.42
SSR1P43307 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.19□□□□□ -1.42
SSR1P43307 MIR3154-201ENST00000577829 84 ntBASIC6.19□□□□□ -1.42
SSR1P43307 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 AC004801.6-201ENST00000616571 978 ntBASIC6.19□□□□□ -1.42
SSR1P43307 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.19□□□□□ -1.42
SSR1P43307 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
SSR1P43307 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
SSR1P43307 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSR1P43307 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
SSR1P43307 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SSR1P43307 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SSR1P43307 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.18□□□□□ -1.42
SSR1P43307 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SSR1P43307 NAMPTP1-201ENST00000440465 2514 ntBASIC6.18□□□□□ -1.42
SSR1P43307 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSR1P43307 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSR1P43307 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSR1P43307 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SSR1P43307 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.18□□□□□ -1.42
SSR1P43307 RN7SKP86-201ENST00000410454 332 ntBASIC6.18□□□□□ -1.42
SSR1P43307 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.18□□□□□ -1.42
SSR1P43307 RPS4XP5-201ENST00000419038 768 ntBASIC6.18□□□□□ -1.42
SSR1P43307 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.18□□□□□ -1.42
SSR1P43307 FAM183DP-201ENST00000421987 399 ntBASIC6.18□□□□□ -1.42
SSR1P43307 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.18□□□□□ -1.42
SSR1P43307 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SSR1P43307 TMX2P1-201ENST00000436507 708 ntBASIC6.18□□□□□ -1.42
SSR1P43307 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.18□□□□□ -1.42
SSR1P43307 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSR1P43307 AC073476.1-201ENST00000452854 407 ntBASIC6.18□□□□□ -1.42
SSR1P43307 AC021006.1-201ENST00000489849 553 ntBASIC6.18□□□□□ -1.42
SSR1P43307 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.18□□□□□ -1.42
SSR1P43307 RN7SKP238-201ENST00000516483 249 ntBASIC6.18□□□□□ -1.42
SSR1P43307 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.18□□□□□ -1.42
SSR1P43307 AC021733.2-201ENST00000518830 497 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms