Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPA3P35244 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RPA3P35244 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RPA3P35244 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RPA3P35244 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RPA3P35244 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RPA3P35244 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RPA3P35244 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.69□□□□□ -1.5
RPA3P35244 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPA3P35244 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RPA3P35244 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RPA3P35244 TMSB4XP2-201ENST00000335179 210 ntBASIC5.69□□□□□ -1.5
RPA3P35244 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RPA3P35244 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.69□□□□□ -1.5
RPA3P35244 U3.23-201ENST00000391132 200 ntBASIC5.69□□□□□ -1.5
RPA3P35244 AL354890.1-201ENST00000413730 346 ntBASIC5.69□□□□□ -1.5
RPA3P35244 HYALP1-201ENST00000417674 1279 ntBASIC5.69□□□□□ -1.5
RPA3P35244 AC066692.1-201ENST00000421721 457 ntBASIC5.69□□□□□ -1.5
RPA3P35244 BX119904.3-201ENST00000428194 957 ntBASIC5.69□□□□□ -1.5
RPA3P35244 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.69□□□□□ -1.5
RPA3P35244 AC126120.1-201ENST00000431082 470 ntBASIC5.69□□□□□ -1.5
RPA3P35244 DEFA9P-201ENST00000433042 285 ntBASIC5.69□□□□□ -1.5
RPA3P35244 GAPDHP48-201ENST00000436626 961 ntBASIC5.69□□□□□ -1.5
RPA3P35244 AL138899.2-201ENST00000439139 499 ntBASIC5.69□□□□□ -1.5
RPA3P35244 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.69□□□□□ -1.5
RPA3P35244 RNA5SP438-201ENST00000516561 112 ntBASIC5.69□□□□□ -1.5
RPA3P35244 AP000619.2-201ENST00000546014 969 ntBASIC5.69□□□□□ -1.5
RPA3P35244 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.69□□□□□ -1.5
RPA3P35244 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
RPA3P35244 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RPA3P35244 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.69□□□□□ -1.5
RPA3P35244 AL139124.1-201ENST00000609123 421 ntBASIC5.69□□□□□ -1.5
RPA3P35244 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.69□□□□□ -1.5
RPA3P35244 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.69□□□□□ -1.5
RPA3P35244 OR4F13P-202ENST00000560066 2054 ntBASIC5.69□□□□□ -1.5
RPA3P35244 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPA3P35244 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPA3P35244 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RPA3P35244 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RPA3P35244 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RPA3P35244 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.69□□□□□ -1.5
RPA3P35244 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.69□□□□□ -1.5
RPA3P35244 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPA3P35244 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RPA3P35244 PDZK1P1-202ENST00000425209 1350 ntBASIC5.68□□□□□ -1.5
RPA3P35244 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RPA3P35244 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RPA3P35244 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
RPA3P35244 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPA3P35244 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RPA3P35244 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPA3P35244 MIR130A-201ENST00000385274 89 ntBASIC5.68□□□□□ -1.5
RPA3P35244 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RPA3P35244 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
RPA3P35244 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.68□□□□□ -1.5
RPA3P35244 NDUFS5P5-201ENST00000437256 321 ntBASIC5.68□□□□□ -1.5
RPA3P35244 DNAJA1P5-201ENST00000440278 943 ntBASIC5.68□□□□□ -1.5
RPA3P35244 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.68□□□□□ -1.5
RPA3P35244 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.68□□□□□ -1.5
RPA3P35244 AL359839.1-201ENST00000451975 1160 ntBASIC5.68□□□□□ -1.5
RPA3P35244 AC060775.1-201ENST00000518241 520 ntBASIC5.68□□□□□ -1.5
RPA3P35244 TRIM77BP-201ENST00000524985 1119 ntBASIC5.68□□□□□ -1.5
RPA3P35244 AC006530.1-201ENST00000555980 571 ntBASIC5.68□□□□□ -1.5
RPA3P35244 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.68□□□□□ -1.5
RPA3P35244 AL049840.6-201ENST00000604583 345 ntBASIC5.68□□□□□ -1.5
RPA3P35244 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.68□□□□□ -1.5
RPA3P35244 FO681491.1-202ENST00000623392 737 ntBASIC5.68□□□□□ -1.5
RPA3P35244 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPA3P35244 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
RPA3P35244 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RPA3P35244 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPA3P35244 AC078880.4-201ENST00000617627 1749 ntBASIC5.68□□□□□ -1.5
RPA3P35244 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPA3P35244 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPA3P35244 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPA3P35244 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPA3P35244 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPA3P35244 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPA3P35244 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPA3P35244 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.67□□□□□ -1.5
RPA3P35244 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
RPA3P35244 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPA3P35244 AC092681.1-201ENST00000297369 291 ntBASIC5.67□□□□□ -1.5
RPA3P35244 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.67□□□□□ -1.5
RPA3P35244 AC019205.1-201ENST00000421830 730 ntBASIC5.67□□□□□ -1.5
RPA3P35244 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.67□□□□□ -1.5
RPA3P35244 PCBP2P1-201ENST00000437262 977 ntBASIC5.67□□□□□ -1.5
RPA3P35244 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.67□□□□□ -1.5
RPA3P35244 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.67□□□□□ -1.5
RPA3P35244 EIF5AP4-201ENST00000441206 465 ntBASIC5.67□□□□□ -1.5
RPA3P35244 RPS10P18-201ENST00000442662 495 ntBASIC5.67□□□□□ -1.5
RPA3P35244 HMGN1P2-201ENST00000445197 310 ntBASIC5.67□□□□□ -1.5
RPA3P35244 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.67□□□□□ -1.5
RPA3P35244 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.67□□□□□ -1.5
RPA3P35244 HLA-DPA3-207ENST00000454398 229 ntBASIC5.67□□□□□ -1.5
RPA3P35244 NPM1P28-201ENST00000492269 840 ntBASIC5.67□□□□□ -1.5
RPA3P35244 AC114781.3-201ENST00000512083 142 ntBASIC5.67□□□□□ -1.5
RPA3P35244 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.67□□□□□ -1.5
RPA3P35244 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.67□□□□□ -1.5
RPA3P35244 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms