Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.53□□□□□ -1.52
PTPN6P29350 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.53□□□□□ -1.52
PTPN6P29350 AP003396.4-201ENST00000527574 265 ntBASIC5.53□□□□□ -1.52
PTPN6P29350 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN6P29350 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN6P29350 AC007956.1-201ENST00000555623 542 ntBASIC5.53□□□□□ -1.52
PTPN6P29350 RPA2P1-201ENST00000556557 721 ntBASIC5.53□□□□□ -1.52
PTPN6P29350 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.53□□□□□ -1.52
PTPN6P29350 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.53□□□□□ -1.52
PTPN6P29350 TXNP4-201ENST00000575018 310 ntBASIC5.53□□□□□ -1.52
PTPN6P29350 AP005119.1-201ENST00000580956 292 ntBASIC5.53□□□□□ -1.52
PTPN6P29350 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.53□□□□□ -1.52
PTPN6P29350 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN6P29350 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.53□□□□□ -1.52
PTPN6P29350 AC245014.3-201ENST00000618589 347 ntBASIC5.53□□□□□ -1.52
PTPN6P29350 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.53□□□□□ -1.52
PTPN6P29350 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN6P29350 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PTPN6P29350 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.53□□□□□ -1.52
PTPN6P29350 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN6P29350 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN6P29350 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN6P29350 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PTPN6P29350 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTPN6P29350 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PTPN6P29350 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PTPN6P29350 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.52□□□□□ -1.53
PTPN6P29350 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PTPN6P29350 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN6P29350 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN6P29350 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 SELENOWP1-201ENST00000322792 252 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN6P29350 AL158827.1-201ENST00000416300 391 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 PTP4A1P1-201ENST00000420539 515 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN6P29350 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN6P29350 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN6P29350 DNAJA1P5-201ENST00000440278 943 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 SNRPFP2-201ENST00000440710 251 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 AC015983.1-201ENST00000441577 373 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 AC009963.4-201ENST00000448535 339 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 CST12P-201ENST00000457644 362 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN6P29350 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN6P29350 TRIM77BP-201ENST00000524985 1119 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PTPN6P29350 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN6P29350 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN6P29350 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.52□□□□□ -1.53
PTPN6P29350 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN6P29350 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.52□□□□□ -1.53
PTPN6P29350 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN6P29350 GARSP1-201ENST00000570895 719 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.52□□□□□ -1.53
PTPN6P29350 AC090236.2-201ENST00000587933 1101 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPN6P29350 AL138895.2-201ENST00000603019 178 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 HIRAP1-201ENST00000605318 787 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PTPN6P29350 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPN6P29350 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 PSG10P-201ENST00000501199 1500 ntBASIC5.52□□□□□ -1.53
PTPN6P29350 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPN6P29350 AL592429.1-201ENST00000403909 1473 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.51□□□□□ -1.53
PTPN6P29350 AC015689.2-201ENST00000528172 1738 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PTPN6P29350 RBPJP7-201ENST00000442803 1447 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 RBPJP5-201ENST00000449433 1447 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 MFSD8-219ENST00000641228 2559 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 SNRPEP6-201ENST00000407465 277 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 CDY17P-201ENST00000414121 1282 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN6P29350 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 TRGV7-201ENST00000427089 353 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 CDY8P-201ENST00000428380 1279 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 AC073072.2-201ENST00000447425 348 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 CDY20P-201ENST00000447528 1279 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 AC005077.1-201ENST00000449226 375 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms