Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD40P25942 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 SNORA62.2-201ENST00000364672 152 ntBASIC5.93□□□□□ -1.46
CD40P25942 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD40P25942 HNRNPH1P2-201ENST00000396845 1210 ntBASIC5.93□□□□□ -1.46
CD40P25942 RNU6-757P-201ENST00000410334 100 ntBASIC5.93□□□□□ -1.46
CD40P25942 RNU6-575P-201ENST00000411326 105 ntBASIC5.93□□□□□ -1.46
CD40P25942 SETP15-201ENST00000412724 337 ntBASIC5.93□□□□□ -1.46
CD40P25942 BTF3L4P1-201ENST00000413813 468 ntBASIC5.93□□□□□ -1.46
CD40P25942 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.93□□□□□ -1.46
CD40P25942 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.93□□□□□ -1.46
CD40P25942 GTF2IP23-201ENST00000423746 351 ntBASIC5.93□□□□□ -1.46
CD40P25942 NANOGP4-201ENST00000427230 913 ntBASIC5.93□□□□□ -1.46
CD40P25942 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.93□□□□□ -1.46
CD40P25942 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.93□□□□□ -1.46
CD40P25942 RPEP4-201ENST00000437636 602 ntBASIC5.93□□□□□ -1.46
CD40P25942 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC5.93□□□□□ -1.46
CD40P25942 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.93□□□□□ -1.46
CD40P25942 AC064862.5-201ENST00000440618 334 ntBASIC5.93□□□□□ -1.46
CD40P25942 AL034369.1-201ENST00000453808 477 ntBASIC5.93□□□□□ -1.46
CD40P25942 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 RNU7-27P-201ENST00000459281 62 ntBASIC5.93□□□□□ -1.46
CD40P25942 AC092754.2-201ENST00000463506 460 ntBASIC5.93□□□□□ -1.46
CD40P25942 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 BZW1P2-201ENST00000473537 826 ntBASIC5.93□□□□□ -1.46
CD40P25942 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.93□□□□□ -1.46
CD40P25942 LINC00888-204ENST00000487386 421 ntBASIC5.93□□□□□ -1.46
CD40P25942 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.93□□□□□ -1.46
CD40P25942 AC021146.8-201ENST00000507455 733 ntBASIC5.93□□□□□ -1.46
CD40P25942 SNX18P23-201ENST00000510867 677 ntBASIC5.93□□□□□ -1.46
CD40P25942 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.93□□□□□ -1.46
CD40P25942 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.93□□□□□ -1.46
CD40P25942 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.93□□□□□ -1.46
CD40P25942 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.93□□□□□ -1.46
CD40P25942 AP002812.4-201ENST00000532139 286 ntBASIC5.93□□□□□ -1.46
CD40P25942 OR4A21P-201ENST00000532759 944 ntBASIC5.93□□□□□ -1.46
CD40P25942 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.93□□□□□ -1.46
CD40P25942 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.93□□□□□ -1.46
CD40P25942 HIGD1AP17-201ENST00000554576 276 ntBASIC5.93□□□□□ -1.46
CD40P25942 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.93□□□□□ -1.46
CD40P25942 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.93□□□□□ -1.46
CD40P25942 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.93□□□□□ -1.46
CD40P25942 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.93□□□□□ -1.46
CD40P25942 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.93□□□□□ -1.46
CD40P25942 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 RPL7AP69-201ENST00000595306 806 ntBASIC5.93□□□□□ -1.46
CD40P25942 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD40P25942 MIR6885-201ENST00000612241 66 ntBASIC5.93□□□□□ -1.46
CD40P25942 AC026951.2-201ENST00000613847 241 ntBASIC5.93□□□□□ -1.46
CD40P25942 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 AC091931.1-201ENST00000623488 728 ntBASIC5.93□□□□□ -1.46
CD40P25942 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CD40P25942 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CD40P25942 MKI67P1-201ENST00000604297 1460 ntBASIC5.93□□□□□ -1.46
CD40P25942 FLJ42393-201ENST00000623801 2270 ntBASIC5.93□□□□□ -1.46
CD40P25942 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CD40P25942 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC5.93□□□□□ -1.46
CD40P25942 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.93□□□□□ -1.46
CD40P25942 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CD40P25942 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CD40P25942 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD40P25942 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CD40P25942 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD40P25942 UGT2B25P-201ENST00000511504 1586 ntBASIC5.93□□□□□ -1.46
CD40P25942 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CD40P25942 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CD40P25942 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.92□□□□□ -1.46
CD40P25942 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CD40P25942 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CD40P25942 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CD40P25942 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CD40P25942 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC5.92□□□□□ -1.46
CD40P25942 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CD40P25942 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CD40P25942 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC5.92□□□□□ -1.46
CD40P25942 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CD40P25942 SPATA31C1-201ENST00000420021 3895 ntBASIC5.92□□□□□ -1.46
CD40P25942 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CD40P25942 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
CD40P25942 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CD40P25942 CDC27P2-201ENST00000425026 1922 ntBASIC5.92□□□□□ -1.46
CD40P25942 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CD40P25942 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CD40P25942 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CD40P25942 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CD40P25942 RNU6-560P-201ENST00000364007 108 ntBASIC5.92□□□□□ -1.46
CD40P25942 SNORD94-201ENST00000386037 137 ntBASIC5.92□□□□□ -1.46
CD40P25942 AC104297.1-201ENST00000393779 870 ntBASIC5.92□□□□□ -1.46
CD40P25942 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.92□□□□□ -1.46
CD40P25942 AL590084.2-201ENST00000401481 382 ntBASIC5.92□□□□□ -1.46
CD40P25942 AL021407.1-201ENST00000404531 386 ntBASIC5.92□□□□□ -1.46
CD40P25942 RNU6-77P-201ENST00000410554 91 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms