Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 AL157762.1-201ENST00000619612 415 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 AC007683.2-201ENST00000624681 714 ntBASIC4.81□□□□□ -1.64
COL8A2P25067 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.81□□□□□ -1.64
COL8A2P25067 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.81□□□□□ -1.64
COL8A2P25067 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC4.81□□□□□ -1.64
COL8A2P25067 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL8A2P25067 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL8A2P25067 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.81□□□□□ -1.64
COL8A2P25067 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC4.81□□□□□ -1.64
COL8A2P25067 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.81□□□□□ -1.64
COL8A2P25067 RARSP1-201ENST00000542842 1418 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.8□□□□□ -1.64
COL8A2P25067 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
COL8A2P25067 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.8□□□□□ -1.64
COL8A2P25067 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.8□□□□□ -1.64
COL8A2P25067 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
COL8A2P25067 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.8□□□□□ -1.64
COL8A2P25067 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 RN7SKP160-201ENST00000363804 340 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 RNA5SP132-201ENST00000364725 118 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COL8A2P25067 AL391361.1-201ENST00000405580 489 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 GTF3AP1-201ENST00000416942 1004 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.8□□□□□ -1.64
COL8A2P25067 AC113412.1-201ENST00000425840 504 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.8□□□□□ -1.64
COL8A2P25067 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.8□□□□□ -1.64
COL8A2P25067 RPS3AP38-201ENST00000435889 763 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 AL390119.1-201ENST00000440329 312 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 OR7E116P-201ENST00000448529 957 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 LDHBP2-201ENST00000456969 1005 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.8□□□□□ -1.64
COL8A2P25067 RN7SL214P-201ENST00000487317 265 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 TRBV5-2-201ENST00000489095 273 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 DUTP1-201ENST00000493631 470 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.8□□□□□ -1.64
COL8A2P25067 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.8□□□□□ -1.64
COL8A2P25067 HNRNPCP1-201ENST00000556181 766 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.8□□□□□ -1.64
COL8A2P25067 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.8□□□□□ -1.64
COL8A2P25067 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.8□□□□□ -1.64
COL8A2P25067 AP000864.1-201ENST00000609424 650 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 AC090607.5-201ENST00000615692 224 ntBASIC4.8□□□□□ -1.64
COL8A2P25067 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.8□□□□□ -1.64
COL8A2P25067 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.8□□□□□ -1.64
COL8A2P25067 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC4.8□□□□□ -1.64
COL8A2P25067 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
COL8A2P25067 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL8A2P25067 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.8□□□□□ -1.64
COL8A2P25067 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.79□□□□□ -1.64
COL8A2P25067 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL8A2P25067 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL8A2P25067 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.79□□□□□ -1.64
COL8A2P25067 CIR1P2-201ENST00000514821 1342 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COL8A2P25067 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL8A2P25067 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
COL8A2P25067 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL8A2P25067 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.79□□□□□ -1.64
COL8A2P25067 RPL23AP17-201ENST00000401064 499 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 AL133173.1-201ENST00000423458 397 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.79□□□□□ -1.64
COL8A2P25067 AL590399.4-201ENST00000436561 601 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.79□□□□□ -1.64
COL8A2P25067 REG1CP-206ENST00000447469 496 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.79□□□□□ -1.64
COL8A2P25067 RPS23P2-201ENST00000463671 415 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 SIAH1P1-201ENST00000479411 923 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 AC079080.1-201ENST00000479841 822 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 RPS3AP15-201ENST00000483874 781 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.79□□□□□ -1.64
COL8A2P25067 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.79□□□□□ -1.64
COL8A2P25067 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.79□□□□□ -1.64
COL8A2P25067 AC105384.2-201ENST00000508433 640 ntBASIC4.79□□□□□ -1.64
COL8A2P25067 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC4.79□□□□□ -1.64
COL8A2P25067 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.79□□□□□ -1.64
COL8A2P25067 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.79□□□□□ -1.64
COL8A2P25067 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.79□□□□□ -1.64
COL8A2P25067 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.79□□□□□ -1.64
COL8A2P25067 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms