Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDH3P22223 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH3P22223 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
CDH3P22223 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH3P22223 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH3P22223 AF287957.1-201ENST00000607368 1595 ntBASIC5.8□□□□□ -1.48
CDH3P22223 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH3P22223 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH3P22223 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH3P22223 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH3P22223 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH3P22223 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH3P22223 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH3P22223 AC138907.8-201ENST00000623981 2256 ntBASIC5.8□□□□□ -1.48
CDH3P22223 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDH3P22223 RNA5SP273-201ENST00000362484 113 ntBASIC5.8□□□□□ -1.48
CDH3P22223 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CDH3P22223 AL121977.1-201ENST00000401636 979 ntBASIC5.8□□□□□ -1.48
CDH3P22223 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDH3P22223 CASKP1-201ENST00000412870 582 ntBASIC5.8□□□□□ -1.48
CDH3P22223 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH3P22223 AC234781.4-201ENST00000419384 244 ntBASIC5.8□□□□□ -1.48
CDH3P22223 BX276092.6-201ENST00000430476 250 ntBASIC5.8□□□□□ -1.48
CDH3P22223 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH3P22223 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH3P22223 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH3P22223 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH3P22223 AL358876.1-201ENST00000453364 1075 ntBASIC5.8□□□□□ -1.48
CDH3P22223 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH3P22223 RPL7L1P3-201ENST00000455249 689 ntBASIC5.8□□□□□ -1.48
CDH3P22223 BX276092.8-201ENST00000455722 250 ntBASIC5.8□□□□□ -1.48
CDH3P22223 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH3P22223 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH3P22223 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH3P22223 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.8□□□□□ -1.48
CDH3P22223 AP001960.1-201ENST00000506494 658 ntBASIC5.8□□□□□ -1.48
CDH3P22223 UGT2A3P7-201ENST00000510485 734 ntBASIC5.8□□□□□ -1.48
CDH3P22223 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH3P22223 AC114781.3-201ENST00000512083 142 ntBASIC5.8□□□□□ -1.48
CDH3P22223 RNA5SP438-201ENST00000516561 112 ntBASIC5.8□□□□□ -1.48
CDH3P22223 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH3P22223 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH3P22223 TPM3P3-201ENST00000521343 354 ntBASIC5.8□□□□□ -1.48
CDH3P22223 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH3P22223 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDH3P22223 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH3P22223 NANOGNBP2-201ENST00000544753 553 ntBASIC5.8□□□□□ -1.48
CDH3P22223 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH3P22223 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH3P22223 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH3P22223 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH3P22223 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH3P22223 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH3P22223 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH3P22223 MIR6793-201ENST00000612376 63 ntBASIC5.8□□□□□ -1.48
CDH3P22223 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH3P22223 AC069234.4-201ENST00000621276 412 ntBASIC5.8□□□□□ -1.48
CDH3P22223 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH3P22223 AC129915.3-201ENST00000634128 948 ntBASIC5.8□□□□□ -1.48
CDH3P22223 AC099654.6-201ENST00000636487 512 ntBASIC5.8□□□□□ -1.48
CDH3P22223 AC026523.2-201ENST00000625039 7739 ntBASIC5.8□□□□□ -1.48
CDH3P22223 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH3P22223 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CDH3P22223 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH3P22223 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH3P22223 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CDH3P22223 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
CDH3P22223 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH3P22223 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH3P22223 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH3P22223 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH3P22223 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH3P22223 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH3P22223 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CDH3P22223 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH3P22223 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH3P22223 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH3P22223 OR7E25P-201ENST00000344844 931 ntBASIC5.79□□□□□ -1.48
CDH3P22223 AC007068.1-201ENST00000396690 844 ntBASIC5.79□□□□□ -1.48
CDH3P22223 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH3P22223 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH3P22223 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH3P22223 NMD3P2-201ENST00000421815 761 ntBASIC5.79□□□□□ -1.48
CDH3P22223 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH3P22223 AL389925.1-201ENST00000432257 728 ntBASIC5.79□□□□□ -1.48
CDH3P22223 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.79□□□□□ -1.48
CDH3P22223 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH3P22223 RN7SL193P-201ENST00000491708 276 ntBASIC5.79□□□□□ -1.48
CDH3P22223 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDH3P22223 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CDH3P22223 RNA5SP271-201ENST00000516700 88 ntBASIC5.79□□□□□ -1.48
CDH3P22223 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH3P22223 AC110056.1-201ENST00000525759 911 ntBASIC5.79□□□□□ -1.48
CDH3P22223 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH3P22223 AC068305.2-201ENST00000550567 1205 ntBASIC5.79□□□□□ -1.48
CDH3P22223 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH3P22223 NPM1P42-201ENST00000560329 862 ntBASIC5.79□□□□□ -1.48
CDH3P22223 AC090651.1-201ENST00000567865 634 ntBASIC5.79□□□□□ -1.48
CDH3P22223 AC092121.1-201ENST00000569452 202 ntBASIC5.79□□□□□ -1.48
CDH3P22223 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms