Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 CDY20P-201ENST00000447528 1279 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 CYCSP42-201ENST00000450823 238 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 RPS4XP6-201ENST00000477670 797 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC055733.3-201ENST00000505214 523 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 MTND5P13-201ENST00000513046 1079 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 FABP5P12-201ENST00000515543 389 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 RNU6-1028P-201ENST00000517164 93 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 MTCO1P49-201ENST00000523429 802 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC023968.1-201ENST00000560719 475 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC007448.1-201ENST00000582714 234 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC091135.1-201ENST00000585943 307 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AL135786.2-201ENST00000608422 615 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC092794.1-201ENST00000612734 582 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 Six3os1_4.1-201ENST00000615706 324 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 U1.41-201ENST00000617626 165 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC005277.2-201ENST00000617898 390 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC130456.6-201ENST00000623745 765 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 AC073488.6-201ENST00000632293 754 ntBASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.83□□□□□ -1
CSB-PGBD3P0DP91 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AL137058.3-201ENST00000624531 3099 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 RNU6-31P-201ENST00000384388 108 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 RNU4-22P-201ENST00000411058 166 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 EIF4A1P1-201ENST00000420241 934 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 RPSAP65-201ENST00000429660 595 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 PMS2P9-201ENST00000441237 515 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AL353898.1-201ENST00000444055 238 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AL096803.2-201ENST00000450032 677 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 VN1R32P-201ENST00000452234 905 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC092754.2-201ENST00000463506 460 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 SRRM1P2-201ENST00000464531 1192 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 RPL19P11-201ENST00000495944 589 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC104109.1-201ENST00000498563 436 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 RPL12P22-201ENST00000519073 490 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 OR4R3P-201ENST00000525084 838 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 OR4A2P-201ENST00000527276 913 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC007346.2-201ENST00000564816 892 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 ZNF415P1-201ENST00000582279 1166 ntBASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CSB-PGBD3P0DP91 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms