Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL1P09341 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.32□□□□□ -1.72
CXCL1P09341 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.32□□□□□ -1.72
CXCL1P09341 TDGP1-201ENST00000543961 1229 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL1P09341 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL1P09341 DHFRP1-201ENST00000579682 559 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.32□□□□□ -1.72
CXCL1P09341 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL1P09341 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL1P09341 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 AC037198.3-201ENST00000616754 526 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 MIR6503-201ENST00000622884 86 ntBASIC4.32□□□□□ -1.72
CXCL1P09341 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.32□□□□□ -1.72
CXCL1P09341 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CXCL1P09341 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.32□□□□□ -1.72
CXCL1P09341 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CXCL1P09341 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL1P09341 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CXCL1P09341 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL1P09341 AC217777.1-201ENST00000570034 1471 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL1P09341 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.31□□□□□ -1.72
CXCL1P09341 AC007996.1-201ENST00000620414 2821 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL1P09341 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL1P09341 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.31□□□□□ -1.72
CXCL1P09341 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.31□□□□□ -1.72
CXCL1P09341 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.31□□□□□ -1.72
CXCL1P09341 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
CXCL1P09341 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL1P09341 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CXCL1P09341 AC003045.1-201ENST00000398779 713 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 UBTFL2-201ENST00000411859 1191 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 RNF10P1-201ENST00000418589 369 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.31□□□□□ -1.72
CXCL1P09341 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL1P09341 AC130360.1-201ENST00000425489 1117 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CXCL1P09341 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL1P09341 RPL19P16-201ENST00000433839 588 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.31□□□□□ -1.72
CXCL1P09341 RPS10P14-201ENST00000440748 502 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 RPS7P3-201ENST00000443360 580 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 ZNF619P1-201ENST00000446539 752 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC4.31□□□□□ -1.72
CXCL1P09341 RPS18P1-201ENST00000447840 458 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.31□□□□□ -1.72
CXCL1P09341 AC023245.1-201ENST00000468501 517 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 NIFKP7-201ENST00000503365 834 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 AC105384.2-201ENST00000508433 640 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.31□□□□□ -1.72
CXCL1P09341 RNA5SP75-201ENST00000516841 111 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.31□□□□□ -1.72
CXCL1P09341 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL1P09341 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
CXCL1P09341 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.31□□□□□ -1.72
CXCL1P09341 AC139697.1-201ENST00000548429 745 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.31□□□□□ -1.72
CXCL1P09341 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL1P09341 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.31□□□□□ -1.72
CXCL1P09341 AC005632.2-201ENST00000564271 828 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.31□□□□□ -1.72
CXCL1P09341 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.31□□□□□ -1.72
CXCL1P09341 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.31□□□□□ -1.72
CXCL1P09341 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.31□□□□□ -1.72
CXCL1P09341 AC108738.1-201ENST00000603703 237 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.31□□□□□ -1.72
CXCL1P09341 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CXCL1P09341 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.31□□□□□ -1.72
CXCL1P09341 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL1P09341 PROS2P-201ENST00000474651 1951 ntBASIC4.31□□□□□ -1.72
CXCL1P09341 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.31□□□□□ -1.72
CXCL1P09341 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CXCL1P09341 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 AL450345.1-202ENST00000605741 3881 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.3□□□□□ -1.72
CXCL1P09341 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.3□□□□□ -1.72
CXCL1P09341 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.3□□□□□ -1.72
CXCL1P09341 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CXCL1P09341 AC017079.1-201ENST00000333650 415 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 SNORA21-201ENST00000362423 132 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 RNA5SP85-201ENST00000365378 119 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.3□□□□□ -1.72
CXCL1P09341 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CXCL1P09341 PRELID1P1-201ENST00000403549 660 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 AL117344.1-201ENST00000407196 616 ntBASIC4.3□□□□□ -1.72
CXCL1P09341 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms