Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-DOAP06340 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HLA-DOAP06340 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 AC005034.3-201ENST00000604845 1747 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
HLA-DOAP06340 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
HLA-DOAP06340 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HLA-DOAP06340 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 SNORA64.1-201ENST00000362600 132 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 OR3A2-201ENST00000408891 1076 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 AC073909.1-201ENST00000447112 999 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 RNU1-88P-201ENST00000459274 128 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 RPL38P3-201ENST00000484463 213 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 ATP5LP3-201ENST00000514223 304 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 RNU6-964P-201ENST00000516524 69 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 AL049872.1-201ENST00000556323 322 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 AC096947.1-201ENST00000603233 470 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 AL356490.1-201ENST00000623079 479 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 AC004777.1-201ENST00000624317 287 ntBASIC6.9□□□□□ -1.3
HLA-DOAP06340 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.9□□□□□ -1.3
HLA-DOAP06340 MTCO1P22-201ENST00000604619 1360 ntBASIC6.9□□□□□ -1.31
HLA-DOAP06340 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
HLA-DOAP06340 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.9□□□□□ -1.31
HLA-DOAP06340 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.9□□□□□ -1.31
HLA-DOAP06340 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HLA-DOAP06340 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HLA-DOAP06340 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.9□□□□□ -1.31
HLA-DOAP06340 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.9□□□□□ -1.31
HLA-DOAP06340 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HLA-DOAP06340 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC027279.4-201ENST00000624371 2072 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 OR2W4P-201ENST00000406496 926 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 AL357752.1-201ENST00000412817 349 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC019205.1-201ENST00000421830 730 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 FAR1P1-201ENST00000427163 934 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 AL691517.1-201ENST00000440833 1235 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 FRG2FP-204ENST00000453982 852 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 FCF1P6-201ENST00000456841 595 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 BNIP3P31-201ENST00000604515 566 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 AL451064.1-201ENST00000607718 471 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC016957.2-201ENST00000616998 848 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 AL390318.1-201ENST00000624564 687 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 RARSP1-201ENST00000542842 1418 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 AC130304.1-201ENST00000622942 2385 ntBASIC6.89□□□□□ -1.31
HLA-DOAP06340 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms