Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFP01375 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFP01375 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFP01375 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFP01375 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFP01375 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFP01375 RPL11P3-201ENST00000395256 523 ntBASIC5.53□□□□□ -1.52
TNFP01375 Z93019.1-201ENST00000416450 973 ntBASIC5.53□□□□□ -1.52
TNFP01375 BX510359.3-201ENST00000422168 306 ntBASIC5.53□□□□□ -1.52
TNFP01375 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFP01375 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFP01375 MYO5BP2-201ENST00000449815 1277 ntBASIC5.53□□□□□ -1.52
TNFP01375 AL606490.1-201ENST00000452266 765 ntBASIC5.53□□□□□ -1.52
TNFP01375 RANP1-206ENST00000455094 651 ntBASIC5.53□□□□□ -1.52
TNFP01375 RN7SL583P-201ENST00000475692 287 ntBASIC5.53□□□□□ -1.52
TNFP01375 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFP01375 EIF1P7-201ENST00000487533 337 ntBASIC5.53□□□□□ -1.52
TNFP01375 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFP01375 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFP01375 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFP01375 AC027026.1-201ENST00000532323 742 ntBASIC5.53□□□□□ -1.52
TNFP01375 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.53□□□□□ -1.52
TNFP01375 MIR4311-201ENST00000580794 100 ntBASIC5.53□□□□□ -1.52
TNFP01375 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.53□□□□□ -1.52
TNFP01375 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFP01375 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TNFP01375 AC021766.1-201ENST00000624404 741 ntBASIC5.53□□□□□ -1.52
TNFP01375 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFP01375 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
TNFP01375 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFP01375 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFP01375 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TNFP01375 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFP01375 EIF3EP2-201ENST00000423042 1814 ntBASIC5.53□□□□□ -1.52
TNFP01375 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFP01375 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFP01375 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
TNFP01375 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TNFP01375 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFP01375 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFP01375 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFP01375 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFP01375 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFP01375 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFP01375 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFP01375 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.52□□□□□ -1.53
TNFP01375 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TNFP01375 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
TNFP01375 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TNFP01375 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFP01375 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFP01375 PWAR1-201ENST00000624188 2414 ntBASIC5.52□□□□□ -1.53
TNFP01375 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFP01375 RN7SKP6-201ENST00000364795 319 ntBASIC5.52□□□□□ -1.53
TNFP01375 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFP01375 AC009804.1-201ENST00000400949 179 ntBASIC5.52□□□□□ -1.53
TNFP01375 MIR1178-201ENST00000408396 91 ntBASIC5.52□□□□□ -1.53
TNFP01375 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFP01375 AP000534.2-201ENST00000412729 568 ntBASIC5.52□□□□□ -1.53
TNFP01375 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.52□□□□□ -1.53
TNFP01375 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.52□□□□□ -1.53
TNFP01375 AC019185.1-201ENST00000442718 389 ntBASIC5.52□□□□□ -1.53
TNFP01375 AL163193.1-201ENST00000444895 788 ntBASIC5.52□□□□□ -1.53
TNFP01375 VDAC2P4-201ENST00000452925 711 ntBASIC5.52□□□□□ -1.53
TNFP01375 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.52□□□□□ -1.53
TNFP01375 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFP01375 RPS7P6-201ENST00000485777 579 ntBASIC5.52□□□□□ -1.53
TNFP01375 AC090638.1-201ENST00000498296 909 ntBASIC5.52□□□□□ -1.53
TNFP01375 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFP01375 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.52□□□□□ -1.53
TNFP01375 SUGT1P3-202ENST00000604259 383 ntBASIC5.52□□□□□ -1.53
TNFP01375 AC013244.1-201ENST00000604279 193 ntBASIC5.52□□□□□ -1.53
TNFP01375 AL359513.1-201ENST00000614364 557 ntBASIC5.52□□□□□ -1.53
TNFP01375 MIR6837-201ENST00000620884 64 ntBASIC5.52□□□□□ -1.53
TNFP01375 SAMMSON-209ENST00000641222 1100 ntBASIC5.52□□□□□ -1.53
TNFP01375 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFP01375 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFP01375 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFP01375 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFP01375 MAPK10-261ENST00000641050 3109 ntBASIC5.52□□□□□ -1.53
TNFP01375 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFP01375 AL049634.1-201ENST00000453770 1720 ntBASIC5.51□□□□□ -1.53
TNFP01375 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TNFP01375 MARK2P4-201ENST00000503381 2380 ntBASIC5.51□□□□□ -1.53
TNFP01375 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFP01375 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFP01375 RNA5SP91-201ENST00000390902 119 ntBASIC5.51□□□□□ -1.53
TNFP01375 AL009179.1-201ENST00000406085 265 ntBASIC5.51□□□□□ -1.53
TNFP01375 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFP01375 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFP01375 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.51□□□□□ -1.53
TNFP01375 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFP01375 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFP01375 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFP01375 RPL7P39-201ENST00000481157 744 ntBASIC5.51□□□□□ -1.53
TNFP01375 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFP01375 SUMO2P19-201ENST00000518920 295 ntBASIC5.51□□□□□ -1.53
TNFP01375 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFP01375 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFP01375 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms