Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.9□□□□□ -1.3
MBD4O95243 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
MBD4O95243 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
MBD4O95243 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
MBD4O95243 BX284613.1-201ENST00000452221 1641 ntBASIC6.9□□□□□ -1.31
MBD4O95243 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.9□□□□□ -1.31
MBD4O95243 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.9□□□□□ -1.31
MBD4O95243 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
MBD4O95243 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
MBD4O95243 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.89□□□□□ -1.31
MBD4O95243 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
MBD4O95243 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
MBD4O95243 RNA5SP242-201ENST00000364171 118 ntBASIC6.89□□□□□ -1.31
MBD4O95243 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
MBD4O95243 AC092642.1-201ENST00000392417 425 ntBASIC6.89□□□□□ -1.31
MBD4O95243 AC098592.2-201ENST00000413158 265 ntBASIC6.89□□□□□ -1.31
MBD4O95243 NIFKP3-201ENST00000417799 865 ntBASIC6.89□□□□□ -1.31
MBD4O95243 RPL34P3-201ENST00000421454 338 ntBASIC6.89□□□□□ -1.31
MBD4O95243 CHEK2P5-201ENST00000423877 246 ntBASIC6.89□□□□□ -1.31
MBD4O95243 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.89□□□□□ -1.31
MBD4O95243 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.89□□□□□ -1.31
MBD4O95243 USP24P1-201ENST00000433802 779 ntBASIC6.89□□□□□ -1.31
MBD4O95243 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.89□□□□□ -1.31
MBD4O95243 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.89□□□□□ -1.31
MBD4O95243 EEF1B2P6-201ENST00000445713 673 ntBASIC6.89□□□□□ -1.31
MBD4O95243 OR7E116P-201ENST00000448529 957 ntBASIC6.89□□□□□ -1.31
MBD4O95243 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.89□□□□□ -1.31
MBD4O95243 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.89□□□□□ -1.31
MBD4O95243 AC079080.1-201ENST00000479841 822 ntBASIC6.89□□□□□ -1.31
MBD4O95243 MTND3P6-201ENST00000485242 339 ntBASIC6.89□□□□□ -1.31
MBD4O95243 AC073610.1-201ENST00000489971 396 ntBASIC6.89□□□□□ -1.31
MBD4O95243 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.89□□□□□ -1.31
MBD4O95243 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.89□□□□□ -1.31
MBD4O95243 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.89□□□□□ -1.31
MBD4O95243 RNU6-615P-201ENST00000516065 106 ntBASIC6.89□□□□□ -1.31
MBD4O95243 SNORA43.3-201ENST00000517240 103 ntBASIC6.89□□□□□ -1.31
MBD4O95243 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.89□□□□□ -1.31
MBD4O95243 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.89□□□□□ -1.31
MBD4O95243 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
MBD4O95243 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.89□□□□□ -1.31
MBD4O95243 AC009303.3-201ENST00000591103 736 ntBASIC6.89□□□□□ -1.31
MBD4O95243 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
MBD4O95243 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.89□□□□□ -1.31
MBD4O95243 AC241377.1-201ENST00000619797 406 ntBASIC6.89□□□□□ -1.31
MBD4O95243 AC021422.1-201ENST00000621212 473 ntBASIC6.89□□□□□ -1.31
MBD4O95243 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
MBD4O95243 AC117409.1-201ENST00000470499 1310 ntBASIC6.89□□□□□ -1.31
MBD4O95243 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
MBD4O95243 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.89□□□□□ -1.31
MBD4O95243 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.89□□□□□ -1.31
MBD4O95243 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
MBD4O95243 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
MBD4O95243 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MBD4O95243 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MBD4O95243 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
MBD4O95243 SRRM1P3-201ENST00000426911 2678 ntBASIC6.89□□□□□ -1.31
MBD4O95243 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
MBD4O95243 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MBD4O95243 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
MBD4O95243 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.88□□□□□ -1.31
MBD4O95243 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MBD4O95243 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.88□□□□□ -1.31
MBD4O95243 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.88□□□□□ -1.31
MBD4O95243 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
MBD4O95243 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.88□□□□□ -1.31
MBD4O95243 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.88□□□□□ -1.31
MBD4O95243 MTHFD2P5-201ENST00000320415 844 ntBASIC6.88□□□□□ -1.31
MBD4O95243 RNU1-59P-201ENST00000364829 162 ntBASIC6.88□□□□□ -1.31
MBD4O95243 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
MBD4O95243 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
MBD4O95243 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
MBD4O95243 AC117434.1-201ENST00000419971 836 ntBASIC6.88□□□□□ -1.31
MBD4O95243 NME1P1-201ENST00000420914 382 ntBASIC6.88□□□□□ -1.31
MBD4O95243 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.88□□□□□ -1.31
MBD4O95243 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.88□□□□□ -1.31
MBD4O95243 AC097523.2-201ENST00000435551 652 ntBASIC6.88□□□□□ -1.31
MBD4O95243 LRRC37A14P-201ENST00000452297 462 ntBASIC6.88□□□□□ -1.31
MBD4O95243 YWHAEP1-201ENST00000453697 763 ntBASIC6.88□□□□□ -1.31
MBD4O95243 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
MBD4O95243 RN7SL570P-201ENST00000484405 292 ntBASIC6.88□□□□□ -1.31
MBD4O95243 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
MBD4O95243 AC138866.2-201ENST00000508650 584 ntBASIC6.88□□□□□ -1.31
MBD4O95243 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.88□□□□□ -1.31
MBD4O95243 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.88□□□□□ -1.31
MBD4O95243 HSPE1P2-201ENST00000554777 306 ntBASIC6.88□□□□□ -1.31
MBD4O95243 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.88□□□□□ -1.31
MBD4O95243 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
MBD4O95243 SNORD95-201ENST00000579879 68 ntBASIC6.88□□□□□ -1.31
MBD4O95243 AC063977.5-201ENST00000601044 974 ntBASIC6.88□□□□□ -1.31
MBD4O95243 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.88□□□□□ -1.31
MBD4O95243 U1.25-201ENST00000614085 162 ntBASIC6.88□□□□□ -1.31
MBD4O95243 U1.34-201ENST00000618578 162 ntBASIC6.88□□□□□ -1.31
MBD4O95243 U1.31-201ENST00000620022 160 ntBASIC6.88□□□□□ -1.31
MBD4O95243 AL355480.1-201ENST00000629041 99 ntBASIC6.88□□□□□ -1.31
MBD4O95243 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
MBD4O95243 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
MBD4O95243 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.88□□□□□ -1.31
MBD4O95243 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
MBD4O95243 AC005225.5-201ENST00000623547 2225 ntBASIC6.88□□□□□ -1.31
MBD4O95243 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms