Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX4O60224 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
SSX4O60224 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SSX4O60224 DHFRP2-201ENST00000414224 547 ntBASIC5.44□□□□□ -1.54
SSX4O60224 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX4O60224 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX4O60224 MTND2P11-201ENST00000423638 648 ntBASIC5.44□□□□□ -1.54
SSX4O60224 RPSAP65-201ENST00000429660 595 ntBASIC5.44□□□□□ -1.54
SSX4O60224 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX4O60224 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.44□□□□□ -1.54
SSX4O60224 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SSX4O60224 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.44□□□□□ -1.54
SSX4O60224 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.44□□□□□ -1.54
SSX4O60224 AC112187.1-201ENST00000455837 479 ntBASIC5.44□□□□□ -1.54
SSX4O60224 AC068228.1-201ENST00000461723 211 ntBASIC5.44□□□□□ -1.54
SSX4O60224 AC090602.1-201ENST00000469695 252 ntBASIC5.44□□□□□ -1.54
SSX4O60224 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.44□□□□□ -1.54
SSX4O60224 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX4O60224 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX4O60224 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX4O60224 AC074029.2-201ENST00000551045 634 ntBASIC5.44□□□□□ -1.54
SSX4O60224 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX4O60224 AC090826.1-203ENST00000569235 490 ntBASIC5.44□□□□□ -1.54
SSX4O60224 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.44□□□□□ -1.54
SSX4O60224 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.44□□□□□ -1.54
SSX4O60224 AC067773.1-201ENST00000603284 1094 ntBASIC5.44□□□□□ -1.54
SSX4O60224 AC067838.1-201ENST00000606064 577 ntBASIC5.44□□□□□ -1.54
SSX4O60224 AC092111.2-201ENST00000611627 1414 ntBASIC5.44□□□□□ -1.54
SSX4O60224 LINC00216-201ENST00000623548 1126 ntBASIC5.44□□□□□ -1.54
SSX4O60224 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.44□□□□□ -1.54
SSX4O60224 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.44□□□□□ -1.54
SSX4O60224 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SSX4O60224 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SSX4O60224 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
SSX4O60224 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.44□□□□□ -1.54
SSX4O60224 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSX4O60224 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
SSX4O60224 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
SSX4O60224 LYARP1-201ENST00000436977 1501 ntBASIC5.43□□□□□ -1.54
SSX4O60224 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX4O60224 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.43□□□□□ -1.54
SSX4O60224 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SSX4O60224 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SSX4O60224 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX4O60224 AP001541.1-201ENST00000623322 1904 ntBASIC5.43□□□□□ -1.54
SSX4O60224 AC093225.1-201ENST00000506867 1408 ntBASIC5.43□□□□□ -1.54
SSX4O60224 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
SSX4O60224 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX4O60224 RN7SKP275-201ENST00000364626 301 ntBASIC5.43□□□□□ -1.54
SSX4O60224 RN7SKP81-201ENST00000365603 331 ntBASIC5.43□□□□□ -1.54
SSX4O60224 SNORA5.1-201ENST00000384275 131 ntBASIC5.43□□□□□ -1.54
SSX4O60224 PEX12P1-201ENST00000400284 1048 ntBASIC5.43□□□□□ -1.54
SSX4O60224 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX4O60224 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX4O60224 AC073410.1-201ENST00000435125 589 ntBASIC5.43□□□□□ -1.54
SSX4O60224 RPL6P30-201ENST00000443382 862 ntBASIC5.43□□□□□ -1.54
SSX4O60224 AL161722.1-201ENST00000446972 1032 ntBASIC5.43□□□□□ -1.54
SSX4O60224 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX4O60224 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX4O60224 PCNAP1-201ENST00000505363 709 ntBASIC5.43□□□□□ -1.54
SSX4O60224 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX4O60224 RNA5SP206-201ENST00000516703 121 ntBASIC5.43□□□□□ -1.54
SSX4O60224 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX4O60224 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.43□□□□□ -1.54
SSX4O60224 AC244502.2-201ENST00000543361 851 ntBASIC5.43□□□□□ -1.54
SSX4O60224 AC008147.3-201ENST00000548666 354 ntBASIC5.43□□□□□ -1.54
SSX4O60224 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX4O60224 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX4O60224 TPRX1P1-201ENST00000557620 319 ntBASIC5.43□□□□□ -1.54
SSX4O60224 MRPS21P8-201ENST00000569196 235 ntBASIC5.43□□□□□ -1.54
SSX4O60224 RN7SL753P-201ENST00000581238 290 ntBASIC5.43□□□□□ -1.54
SSX4O60224 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.43□□□□□ -1.54
SSX4O60224 AC018809.2-201ENST00000602436 3823 ntBASIC5.43□□□□□ -1.54
SSX4O60224 HMGB1P51-201ENST00000605166 638 ntBASIC5.43□□□□□ -1.54
SSX4O60224 AC012213.4-201ENST00000606457 354 ntBASIC5.43□□□□□ -1.54
SSX4O60224 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.43□□□□□ -1.54
SSX4O60224 SNORA74.4-201ENST00000607595 199 ntBASIC5.43□□□□□ -1.54
SSX4O60224 AP001437.1-201ENST00000608783 456 ntBASIC5.43□□□□□ -1.54
SSX4O60224 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX4O60224 AC116667.2-201ENST00000641075 823 ntBASIC5.43□□□□□ -1.54
SSX4O60224 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.43□□□□□ -1.54
SSX4O60224 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX4O60224 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SSX4O60224 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.43□□□□□ -1.54
SSX4O60224 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 AC011416.1-201ENST00000514947 1732 ntBASIC5.43□□□□□ -1.54
SSX4O60224 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SSX4O60224 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SSX4O60224 HDAC1P2-201ENST00000453661 1398 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms