Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC006600.2-201ENST00000624834 2506 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 RBMX2P2-201ENST00000257020 946 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 Y_RNA.303-201ENST00000364998 94 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 SNORD65.1-201ENST00000390889 71 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 NPM1P46-201ENST00000399556 865 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 SNORA3.1-201ENST00000408166 111 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 PPIAP2-201ENST00000414143 492 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 DDX11L10-201ENST00000430178 571 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 TMX2P1-201ENST00000436507 708 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 CDC42P2-201ENST00000448566 569 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 TMED11P-201ENST00000479478 690 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AF305872.1-201ENST00000485217 471 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 CDH12P2-201ENST00000504393 298 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 KRT19P6-201ENST00000510983 209 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 OR6M3P-201ENST00000531567 700 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC025260.1-201ENST00000548858 430 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC068305.2-201ENST00000550567 1205 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AL121579.1-201ENST00000555129 305 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC009063.1-201ENST00000563342 702 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 MIR3187-201ENST00000583431 70 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AL022154.1-201ENST00000604698 785 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 BNIP3P4-201ENST00000604946 565 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC090970.3-201ENST00000612566 866 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 ELMO2P1-202ENST00000614283 794 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC092794.2-201ENST00000620933 563 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC009120.7-201ENST00000623452 780 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AC015726.3-201ENST00000624501 418 ntBASIC6.28□□□□□ -1.4
SHISA3A0PJX4 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC022905.1-201ENST00000503430 3048 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 CCDC162P-202ENST00000368966 6751 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 HMGB1P5-201ENST00000255320 642 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 OR10J6P-201ENST00000289731 930 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 Y_RNA.11-201ENST00000362375 109 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 RN7SKP63-201ENST00000363187 301 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 MIR654-201ENST00000385199 81 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.27□□□□□ -1.41
SHISA3A0PJX4 NCSTNP1-201ENST00000406229 144 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 RN7SKP131-201ENST00000410698 301 ntBASIC6.27□□□□□ -1.41
SHISA3A0PJX4 AC245052.5-201ENST00000416320 649 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms